Parus major (Great Tit): 107203252
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Entry
107203252 CDS
T04864
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107203252 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmaj04990
]
107203252 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
pmaj04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107203252 (PDLIM5)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
Motif
Other DBs
NCBI-GeneID:
107203252
NCBI-ProteinID:
XP_018861938
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Position
4:18186834..18318171
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AA seq
868 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNVPLSISRLNDGGKAAQAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVSSIQKPDHFHVTKAEPAEVVKPVPIASAVAPKVTAT
TSVAFNKTPRPFGAVTSSKVTSIPSPSSAFTPAQASAASPCAVPGAHANAKPNAEPWPPV
PGAPKPAVPVPRQHGAAPSASAADGAQDAAEGPRRGGRENQGESKQQNGKNPPKRPPRKH
IVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPENDA
GKKTKKRQTENGDFSIPADLPDGIETQDACVNLNKNSIATLTLEMPPAPEFPSTPVPPLS
GNNASPEPAAALLPITDSHPGGVPSPKLSEHIAAPVPARKITVPAPDAASSFPADEAPPV
PKTCAVATQTIEFPLPADPAGGLPPPALHVGTALGLPPALARHEASLLTCETNSFNKISS
FQSKSSVSHTSICAAKVMLEDPSGNLPILGPSPPPVLSPFEQRSKIKSMAAAAVSAALAV
RARLHEPSACRSLLDALLITPVTKAPLQATAPSRKSTSALELPKSQSDSLEAAQPAPVRS
IPACQDNVDVRPAPANTTPAAVLKPTAPLGSAKGWQPPNQAAPVSGWTSNSIKSPGTTAP
SEKPATTPQLNEQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAH
CKTSMAYIGFVEEKGMLYCEVCYEKFFAPECSKCQRKILGEVINALKQTWHVSCFVCVAC
HNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGDRFLEALGHTWHDTCFVCSV
CSDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcgggccagctccctggggattcaggcttcaggga
ggcaaggatttcaatgtgcctctgtctatctctcgacttaatgatggtggcaaggcagcc
caagcacatgtggggattggtgacgtggttctcaccattgatgggataagcacggatggg
atgactcatctagaagcacagaacaagatcaaggcgtgtacaggcaatttgaacatgact
ctgcaaagagtgtcttctatacaaaaacctgatcattttcatgtgacaaaggcagaacct
gccgaagtagttaagcctgtgcccattgcctctgctgttgcacccaaagtcactgccaca
acgagcgtggctttcaataagacaccgaggccgtttggagctgtaacctcctccaaggtc
acctccatcccatcaccgtcctccgccttcacgccggcgcaggcgtcggccgcatccccg
tgtgccgtgcccggagcgcatgctaacgccaagcctaacgctgagccgtggccgcctgtg
ccgggcgctcctaaacctgcagttcctgtcccacggcagcacggtgccgccccgagcgcc
tcggccgccgacggcgcccaggacgcagccgaggggccgcgacgaggaggcagagagaac
cagggggagagtaaacagcaaaatgggaaaaacccacccaaacgccccccgcggaagcac
atcgtggacacctacacggagttctaccacacgcccacccacagcgacgccagcaagaag
cggctgattgaagacaccgaggactggcacccccgcacaggcaccacccagtcccgctcc
ttccgcatcctcgcccagatcactggcactgatcatatgaaagaaccagaaaatgacgct
gggaagaagactaagaaaaggcaaacagaaaatggagacttcagcatacctgcagaccta
cctgatggaatagaaacccaggatgcctgtgttaatttaaataaaaactccatagctacc
ctgactttggagatgccacctgcaccagaatttccatccacacctgtaccacctttgagt
ggaaacaatgctagtccagaacctgctgctgcccttttgccaataacagattcccaccct
ggcggtgtcccctctcccaaactttctgaacatattgctgcaccagttcctgcaaggaag
ataacggtgcctgctccagatgcagcgagctcttttccggcagatgaagcacctcctgtc
cccaagacgtgtgctgtggccacacagaccatcgagttccctctgcctgctgacccagct
ggggggctgcctcctccagccctgcatgtgggaacagccctcgggctccctcctgccctt
gccaggcatgaagcatctctgcttacttgtgaaacaaattctttcaataaaatctcaagc
tttcagtctaaatcatctgtaagtcatacaagcatctgtgctgcaaaagtaatgctggaa
gatccttcgggaaatctgccgatccttggaccctctcctcctccagttctttctcctttt
gagcagagatcaaaaattaagagcatggctgctgctgcagtgtctgctgctcttgctgtc
cgggccagactccatgagcctagtgcctgccgctcgctgctggacgccctgctcatcacg
cctgtcactaaggctcctctgcaggccaccgcaccctccaggaagtccacaagcgctctg
gagttgccaaagagccagagtgattccctggaagctgcccagcccgccccggtgaggagc
atccctgcctgccaggacaacgtggatgtgagacctgctcctgccaacaccacacctgct
gcagtcctcaagccaacggcacccttgggttctgccaagggctggcagcctccaaaccaa
gcagctcctgtcagtggatggacatcaaacagtattaaatcacctggaacaactgccccg
agtgaaaaacctgcaacgacaccccagctaaatgagcaagacacgttggttcagcgagcg
gagcatattccagcggggaagcgcactcccatgtgtgcacactgcaaccaggtcattaga
ggacccttcttggtggctttgggaaagtcatggcatccagaggagtttaattgtgcccac
tgcaaaacctccatggcatacattggatttgtggaagagaaagggatgctgtactgtgag
gtctgctatgagaagttctttgcccctgagtgttcaaagtgccagaggaagatccttggg
gaagtaataaatgctttgaaacaaacttggcacgtttcctgcttcgtgtgtgtggcctgt
cataaccccatccgcaataatgtctttcacttagaagatggtgatccctactgtgagacg
gattactacgccctctttggtacgatgtgccacggctgtgaattccccattgaagctgga
gacaggtttcttgaagccctgggccacacttggcatgacacttgctttgtatgctctgta
tgtagtgacagcttggagggccagactttcttctccaagaaggacaagccactgtgcaag
aaacacgcccactctatcaacatctga
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