Parus major (Great Tit): 107203370
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Entry
107203370 CDS
T04864
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107203370 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107203370 (SMARCA5)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107203370 (SMARCA5)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
107203370 (SMARCA5)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
107203370 (SMARCA5)
RSF complex
107203370 (SMARCA5)
WICH complex
107203370 (SMARCA5)
B-WICH complex
107203370 (SMARCA5)
NORC complex
107203370 (SMARCA5)
BRF complex
107203370 (SMARCA5)
NuRF complex (fruit fly)
107203370 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
107203370
NCBI-ProteinID:
XP_015480875
Ensembl:
ENSPMJG00000008316
LinkDB
All DBs
Position
4:9473621..9496432
Genome browser
AA seq
1039 aa
AA seq
DB search
MSAGQPPQPDEPPAPPLPPGASTGEAAGTGPPCAAGLAGGDIKMEESFDDASLAKQKEIQ
ETDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQN
LLSAGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQIRGLNWLISL
YENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLQNWMNEFKRWVPT
LRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK
NEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNC
LGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI
LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK
LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDSSKFV
FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE
ERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITDEDI
DHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKLAFTEWIEPP
KRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRK
TIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFI
KANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRR
ISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELR
QCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQ
KRKMDGTPDGRGRKKKLKL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagccgccgcagccggacgagccgcccgcgccgccgctgccaccgggc
gccagcaccggagaggcggcggggacggggccgccctgcgccgccggcctggccggggga
gacatcaagatggaggagtcttttgatgatgcatctctggcgaaacaaaaagaaatccag
gaaacagatcctacatatgaagagaaaatgcaaacagacagagcaaacagatttgagtat
ctgttgaagcagactgagctcttcgctcatttcattcagcctgctgctcagaaaactcca
acttcacctttaaaaatgaaacctggacgtccacgaataaagaaggatgagaaacagaat
ttactgtcagctggcgattatcggcaccgtagaacagagcaggaagaggacgaggagctg
ttaacagaaagctccaagacaacgaatgtctgcactcgatttgaagaatctccgtcttat
gtgaagtggggaaagctgcgtgattaccagattcgaggactgaactggctcatttctctg
tatgaaaatggcatcaatggcattctggcagatgaaatgggtcttgggaagacactgcaa
acaatttctcttcttggctatatgaaacactacagaaacattcctggacctcacatggtg
ttagttcctaagtccactctgcagaactggatgaatgaattcaagagatgggtaccaaca
cttcgagcagtttgtttgatcggtgacaaagaccagcgagctgcctttgtgagggatgtg
ttgttgcctggagaatgggatgtgtgtgtaacatcatacgaaatgcttatcaaagagaag
tcagtattcaaaaagttcaactggagataccttgttatagatgaggcccacaggattaaa
aatgaaaaatcaaagttatcagaaattgtgagggaattcaagactaccaaccggctgcta
ttaactggaactccacttcagaacaatttacatgaactctgggcacttctcaatttcctt
ttgccagatgtctttaactcagctgaagattttgattcatggtttgataccaacaactgt
ctgggggatcaaaaactggtggaacgccttcatatggtgctacgacccttccttctccgt
cgcatcaaggctgatgtggagaaaagcttgcctccaaagaaggaagtaaaaatttatgtg
ggcctcagcaaaatgcagcgagaatggtatacccgaatcctgatgaaggatatagatatt
ctgaactcggctgggaagttggacaagatgagactgttgaacatcctgatgcagctacgg
aaatgctgcaatcacccttacctctttgatggagcagagcctggcccaccttacacaaca
gacatgcatttggtcaccaacagtggcaaaatggtagttctggacaaattgctacctaaa
ttgaaagaacaaggctcaagggttctaatcttcagtcagatgacaagagtcctagatatc
ttggaagattactgtatgtggaggaattatgaatattgcagactggatggacaaacccct
cacaacgaacgacaggcttctattaatgctttcaatgatcctgacagctcaaaatttgtg
ttcatgttgagtacgcgagcaggaggtcttggaatcaatctggctactgctgatgttgta
attctgtatgattcagattggaatccacaagtagacctccaggctatggatcgagcacac
agaattggccagaccaagactgtccgggtgttcaggtttattacagacaataccgtggag
gaaaggatagtggagcgtgcggaaatgaaactccgcctggattccatagtcatccaacaa
ggaagattggtggatcaaaacctgaataagcttggaaaggatgaaatgctgcaaatgatc
agacatggagcgacacatgtgtttgcctcaaaggacagtgagattacagatgaagatatt
gatcacattttggaaagaggggcaaagaagactgcggaaatgaacgaaaaactttcaaag
atgggtgaaagctcccttaggaattttactatggatactgaatctagcgtgtataatttt
gaaggggaagactacagagaaaaacagaagctggcatttacagagtggatcgaaccacct
aaaagagaaagaaaagccaattatgctgtggatgcttacttcagagaggctcttcgagtc
agtgagccaaaagcacccaaggctccaaggcctccaaaacagccaaatgtacaggacttc
cagttctttcctcctcgcctgtttgaactattggaaaaagagattctctactacagaaaa
acaattggttacaaggtacctcgtaatcctgatcttccaaatgcagcccaagcacaaaag
gaagagcagcttaagattgatgaggctgaacctcttaatgatgaagaactggaagaaaaa
gagaaacttctaacccagggcttcactaactggaataagagagatttcaaccagttcatt
aaagcaaatgagaagtggggccgtgatgacattgaaaacatagcacgagaagttgaaggg
aaaaccccagaagaagtcattgagtattcagctgtgttctgggaaagatgcaatgaactc
caagacatagagaagatcatggcacagattgaaagaggagaagccagaattcagagacga
atcagcataaaaaaggctcttgatacaaagattgggagatataaagcccctttccaccaa
ctaagaatatcctatggtactaataaagggaagaattacactgaagaggaggatcgcttc
ctaatctgcatgcttcacaaactaggatttgataaagaaaatgtctatgatgaattaaga
caatgtatccgaaactcgccgcaattcagatttgactggtttctcaagtccagaactgca
atggagctgcaaaggaggtgtaatactttaatcactctcattgaaagagaaaacatggaa
ctggaagaaaaggaaaaggcagaaaagaagaaacgtggaccaaaaccatcttcagcacag
aaacgcaagatggatggcactcctgatgggcgtgggagaaaaaagaagctaaagctgtga
DBGET
integrated database retrieval system
