Parus major (Great Tit): 107203410
Help
Entry
107203410 CDS
T04864
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107203410 (DSCAM)
Cell adhesion molecules [BR:
pmaj04515
]
Immunoglobulin superfamily
DSCAM family
107203410 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
Sp38
V-set_CD47
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
107203410
NCBI-ProteinID:
XP_015480990
Ensembl:
ENSPMJG00000010433
LinkDB
All DBs
Position
1:complement(3575076..4014501)
Genome browser
AA seq
2009 aa
AA seq
DB search
MWMLAVALLHSISHVFSEELHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGA
LYILDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQ
RVELPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPSDSGSYVCEVWNNYG
TAEMIGRLHVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNV
RITGINRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSP
GEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPT
IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTK
EVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARS
IALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTRDVSPQLNQATIIDLHPSSTYNIRM
YAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEII
TTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWM
KDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLET
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
AKFATLNYDGSTIPPLIKSVVQSEEGLGTNEGLKMLVTISCILVGVLLLFVMLLIVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDSLTS
STPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQGTSR
DLGLGQACLEPQKSRTLKRPTVLEPIPMETSSTRDVQSWQPGAVATLPQREGAELGQAQA
KMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgttggccgtcgccttgctccacagcatctcgcatgttttcagtgaagagcta
cacgccagtctctattttgtcaatgcatctctgcaagaggtagtgtttgctagcaccaca
gggactctggtcccctgtccagcagcggggatccccccggtgacgctcagatggtaccta
gcgacgggcgaggagatctacgatgtcccagggatccgccacgtccaccccaatggcact
ctccaaatcttccccttccctccttcaagctttaataacttaatccatgataacacttac
tattgcacagctgaaaatccttcagggaaaatcaggagtcaggatgttcacattaaggct
gttttacgggaaccctatacagtccgtgtggaggaccagaaagccatgagaggcaatgta
gcagtgttcaagtgcattatcccctcctctgtggaggcatacatcactgttgtctcatgg
gagaaagacacagtctcgcttgtctcaggacctagatttctcatcacatccacgggagcc
ttgtatattttagacgtccagaatgaagatggactgtacaactaccgatgtatcacaagg
cacagatacactggagaaacacgacaaagcaacagcgcaagactttttgtatcagaccca
gcgaattcagctccatctatcctagatgggtttgaccaccgcaaagccatggcaggacag
cgagtggagctgccttgcaaagcatcagggcacccggcaccaaagtaccgctggctgaag
gacaacgtgccctgggagcccgacagccgcttccgacagacggtgacggggctgctgatc
gagaacacgcggccctcggactcgggcagctacgtctgcgaggtgtggaacaactacggc
accgccgagatgatcgggcgcctccacgtcaaacaaccgctaaaagccaccatcagcccg
cgcaaagtcaagagcagcgtcggcagccaagtgtccttgtcctgcagcgtgacaggaacc
gaggaccaggagctgtcctggtaccgcaacggggaaatcatcaaccccggcaacaacgtg
cgcatcaccggcatcaaccgcgagaacctgatcatggacggcatggccaagagcgacggc
ggcgcctaccagtgctttgtgcgcaaggacaagatgtcagctcaagactacgtccaggtg
gtgctggaagacggaactcccaaaatcatctctgccttcagcgagaaggtggtgagccca
ggagagccagtgtccctgatgtgcaacgtgaaggggacccccctgcccaccatcacctgg
acactggatgaggatcccatcgtgaaggacggcagccaccggatcagccagatcatcacg
tccgagggcaacgtggtcagttacctgaacatctccaacacccaggtccgggacgggggc
gtttatcgctgcactgccaacaactctgcgggagtcgtcctgtaccaggctcgaataaac
gtaagagggccagcgagcatccggccgatgaagaacatcacagccatcgctgggagggac
acctacatccactgcagggtcattggctacccctactactccatcaagtggtacaagaac
tccaacctgctgcccttcaaccatcgccaagtggcgttcgagaacaacggcacgctgaag
ctctcggacgtgcagaaggaggtggatgagggcgagtacacctgcaatgtcctggtccag
ccccagctgtccaccagccagagcgtgcacgtgacagtgaaagtcccgcctttcatccag
cctttcgagttcccacgcttctccatcgggcagagggtcttcatcccctgcgtggtggtc
tcgggggacctgcccatcaccatcacctggcagaaggacggccggcccatccccgccagc
ctgggcgtcaccatcgacaacatcgacttcaccagctccttgaggatctccaacctgtcc
ctgatgcacaacgggaattacacctgcatagccaggaacgacgctgcagccgtggagcac
cagagccaattaatcgtgagagtgccccccaggtttgtggtccagcccagcgaccaggac
gggatctatggaaaagccgtcattctcaactgctctgccgagggttatcccgttcccacc
atcgtctggaagtactctaaaggtgccggggttccccagttccagccgatcgcgctgaac
ggtcgcatccagctgctgacaaacggctccttgctgattaaacatgtgctggaggaagac
agtggatactacctctgcaaggtcagcaatgatgtgggagcagacgtcagcaagtccatg
tacctcactgttaaaattccagctatgataacctcctacccaaacaccaccctggctact
caaggccaaaagaaggagatgagctgcacagcccatggagagaaacccatcatagtccgc
tgggagaaggaagaccggatcattaaccccgaaatgtcccgttacctggtttccaccaag
gaggttggggatgaggtgatttctaccctgcagattctgccaactgtgcgtgaagattct
ggcttcttttcctgccatgccatcaattcttacggggaggatcgtggaataattcagctc
actgtgcaagaaccccccgacccccctgagatagagatccgggaggtgagagctcggagc
atcgccctcaggtggaccatgggcttcgatggcaacagccccatcaccggctacgacatc
gagtgcaagaacaagtcagactcttgggattctgtccagagaaccagagacgtttctcct
cagctaaaccaagccaccatcatcgacctgcacccgtcctccacctacaacatccgcatg
tacgccaagaaccgcatcggcaaaagcgaggccagcaacgagctcaccatcaccactgat
gaagcagcccctgatggtccacctcaggatgtgcagcttgagcctatatcttcacagagc
atcagagtcacctggaaggctccaaagaagcacctgcagaatggaattatccgtgggtac
cagatcgggtatcgggagtacagcgcggggggaaatttccagttcaacatcatcagcatc
gacaccaccggcgacagcgaggtttatacactgaataacctgaaaaaattcacccagtat
ggcatggtggtacaggcctgtaaccgggctgggatcggaccttcttctcaggaaatcatc
accacaactcttgaggatgtgcccagttgccctccagggaatgtgcaagccactgccacg
tccccagaaaccatctccatctcctggtccacgctggcaaaggaaaccctgaacgggatc
ctgcagggattcagggttatctactgggccaacctcttggatggagagctgggagagata
aagaatgtcactactacccagccatccctggagctggatggcctggaaaaatacaccaac
tacagcatccaggtgttggcttttacccgggctggggatggagtgaggagcgagcagatt
ttcacccgcactaaagaggatgttccaggtcctcccgctggagttaaagcagctgctgcc
tcggcctccacggtttttgtgtcctggctgcctcccctgaagctgaacggcatcatccgg
aaatacacggtgttctgctcacacccctaccccacagtgatcagcgagtttgaagcctct
cccgactcattttcctacagaatccccaacctgagccggaatcgccagtacagcgtgtgg
gtggtggccgtgacggctgcgggaagaggcaacagcagcgagatcatcaccgtggagcca
ctggccaaagctcctgccaggatcctgacgttcagcgggacggtgacaacgccctggatg
aaggacattgtcctcccttgcaaagccgtgggggacccggctccaacagtcaaatggatg
aaggatagtaacgggacacccagtctagtgatgattgatgggcgaaggagcatcttcagc
aacggcagcttcgtcatcaggactgtgaaagcagaagactctgggtactacagctgtgtg
gccagcaacaactggggatcagatgaaatcattctgaatttgcaggtacaagttccacca
gaccagccaagactcactgtatccaaaactacatcttcctctatcactctttcctggata
cctggagacaatggtggcagttctatccgaggttatattctgcagtactcagaggataac
agtgagcagtggggcagtttccccatcagccccagtgagaggtcctacaggctggaaacc
ctgaaatgtggcacctggtacaagttcaccctgactgctcagaacggggtggggccgggg
cgcatcagcgagatcatcgaggccaagacgctcggcaaagagccacagttttccaaggag
caagagctctttgccagcatcaacaccacccgggtgaggctgaacctgatcggctggaac
gacggcggctgccccatcacctccttcaccctggagtaccggccctttgggaccacggtc
tggacaacagcccagaggacatccctgtccaaatcctacatcctctatgacctccaggag
gccacctggtacgagctgcaaatgagagtgtgcaacagtgctggctgtgcagagaaacaa
gccaaattcgccacgcttaattatgatggcagtacaatccctcctctcatcaagtcggtt
gtgcagagcgaggaagggctgggaaccaacgaagggctgaagatgctggtgaccatctcc
tgtatcttggttggggtcttgctgctctttgtgatgctgctgatcgtgaggaggaggagg
agggagcagaggctgaagaggctgcgagatgcaaagagtttggctgaaatgcttatgagc
aagaacaccaggacatcagacacacttaataagcagcagcaaacactgaggatgcacata
gacattcccagagcacagctgctgatagaggagagggacaccatggagaccattgacgac
agatcgacggttctgctcactgatgctgactttggagagacgtccaagcagaagtccctg
actgtcacccacactgtccattaccagtcggtgtcacaagccacggggccactggtggat
gtctctgatgcccggccaggaacaaatcccaccacgaggaggagtgccaaaaccggaccc
accgcgcgcaaccgctacgccagccagtggaccctcaacagaccccaccccaccatatca
gcccacaccctcaccacagactggaggctccccacgcccaggccagcaggatcagtggac
aaggaaagcgacagctacagcgtcagcccctcgcaggacacagaccgggcgaggagcagc
atggtctccacagaaagtgcctcctccacctacgaagagctggcgagggcctacgagcac
gccaagatggaagagcagctgaggcacgccaagttcaccatcacagagtgcttcatctca
gacacctcctcggagcagctgacggcagggaccaacgactacacggacagcctgacgtcc
agcacgccgtccgagtcgggcatctgcaggttcaccgcgtccccgcccaagccccaggac
ggagggcgggtgatgaacatggcagttcccaaggcacatcgcccaggtgatctcatgcat
ctgccaccctaccttaggatggactttttattgaaccgtggcgtgcagggcacgagcaga
gacctgggtttggggcaagcctgcttggagccacagaaaagccgaaccttgaagcgtccc
accgtgctggagccgatccccatggagacatcctccacgagagatgtccagtcatggcaa
cctggtgctgtggcaacgttacctcagcgagaaggagctgagctaggacaggctcaagca
aaaatgagcagctcccaagaatccctgctggactcccggggccacttgaaaggaaacaat
ccctacgcaaaatcctacaccctggtataa
DBGET
integrated database retrieval system
