Parus major (Great Tit): 107203489
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Entry
107203489 CDS
T04864
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107203489 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107203489 (POLR1A)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107203489 (POLR1A)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107203489 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
DUF7708
Motif
Other DBs
NCBI-GeneID:
107203489
NCBI-ProteinID:
XP_015481163
Ensembl:
ENSPMJG00000016785
LinkDB
All DBs
Position
4:complement(63162035..63191450)
Genome browser
AA seq
1707 aa
AA seq
DB search
MRPPKVVPWRRLVGVSFGMYTADEIRKLSVKSITNPQYLDNVGNPAVSGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQLKVLEKGLLHAVHDLEIILNRFIEQCADATGSEIEEELNHHVQEMLQSSQIRDRCSN
VKNVCECRNKLISQFWKSHMGSKKCPNCKSRRSLVRKEHNSKLTVTYPSTMCHKSGEEGI
LDETAGIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHESSGFSPDLFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVIKDAQLIRKLLVFMAKEQCQPIKITEEI
QTAIGGDSEPLDHSVLTTIPGQSIADKLYNTWIRLQSHVNIVFDSDMDKLITEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRG
LTDKKGRIKTFPPAIMKPQRLWTGKQVVSTLLINIIPDNCAPLNLTGKAKIGGRAWVKGP
ARGCLNLDSMCESQVVIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGEVSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKPEADRKRKKIIERSRQSGIEAVRAALNLPEAASCEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNSYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMECHQANQQFKAIKKWRARHQNS
VQRKGGFLLFSQKKLASLKAQLPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTDKC
PDPSLGVWRPDTYFASVSETFENGVEGYINKWQSESSWSYMHPALSSDRLKNLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTP
MMSVPVLNTKKAFKKMKHLKKQLTRVCLAEVLQRVDIEESLHVKNKLNKHRLYKIKFQFL
PHEYYREEKCVKPRQILHFIETRFFKVLLEAIKKKTTKMASFNEVSTRKTTRKDLDDEQD
KTQNNLEAVAEEEENIVDAEVDEGDGDATEKKRRKNQEEEVDYESEEENEEENVNENAED
EEAESGKEETDGAEEDQSRAEGEDSQHLSFVSQTKKGKDGLLQSAEVRVNAVVESHPSIQ
DYTFDTENELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTSKEGE
KEFVLQTEGINLTELFKYSDILDLNRLYCNDIHAMAKNYGIESALRVIIKEIKDVFAVYG
IVVDPRHLSLVADYMCFEGIYKPLNRIGIQSNSSPLQQMTFETSYKFLKEATMMGAHDEL
RSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcccaaagtggtgccgtggcggcggctggttggggtgtccttcgggatgtac
acggccgacgagatcaggaaactgagtgtgaagtccataacaaaccctcagtacctggat
aatgtggggaatccggctgtaagtggactctacgacttggccttgggacctccggactcc
aaagaagtgtgtgcgacttgcatgcagaacttcagcaactgccccggacactttggccat
atagaactgcctctgactgtctacaaccccctgttctttgataaattataccttctcatc
cgaggatcttgtttgaattgccacatgctgacatgtcctcgagccgtggttcacttactg
ctaagtcagctgaaggtgctggagaaagggttgcttcatgctgtccatgaccttgaaatc
attctgaacaggtttatagagcaatgtgcagatgcaacaggctcagaaattgaggaagag
ttgaatcaccacgttcaggaaatgttacaaagctctcaaataagagatcggtgttcaaat
gtcaaaaatgtatgtgagtgtagaaataaactgatatcacagttctggaaatcacatatg
ggttcaaagaaatgcccaaactgcaaatccaggagatcactggtgcggaaggagcacaac
agcaagctgacagtgacctatccttctacaatgtgccataagtcaggagaggaaggcatt
ctggatgaaacagcaggtattgatgaaagccagttagggaagagaggctacctgacacca
atgactgccaaagagtacatcctggctctgtggaagaatgaaggtttctttctgcgttat
ctcttccctgggatggatccccatgagagttcaggattcagtccagacttgtttttttta
gatcttcttgtggttccaccttcaaggtatcgtcctgtaaatcgtgttggagatcgcctg
ttcacaaatgggcagactgtgaacttgcaggctgtgataaaagatgcccaactgatacgg
aagctcttggttttcatggccaaagaacagtgtcagccaataaaaattacagaagaaatt
caaacagcgataggaggggatagtgaacctctggaccattctgtgctgacaacgattcca
ggacagagcattgcagataagctgtacaatacttggatacgtctccagagccatgtcaac
attgtgtttgatagtgacatggacaagctgataacagaaaaataccctggtattcgtcag
ctattggagaagaaggaagggctgttccgcaagcacatgatggggaagcgtgtggatttt
gctgctcgatctgtcatttgccctgacatgtacattgggaccaacgagattggcatcccc
atggtatttgccaccaaactgacttatcctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcatcaatggccccaaggtgcaccctggggcctccatggtcattaac
gaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggccatcgcc
aagcagctcctcaccccctcctcaggggcaccccagacagggctgaagattgtgtgtcgg
cacattaagaacggggatgtgctgctgctgaaccgccagcccacacttcacagaccttcc
atccaagctcaccgcgcccgaatcctgcccggggagaaggtgctgaggcttcactacgcc
aactgcaaggcttacaacgctgacttcgatggggatgaaatgaacgcccatttcccacag
agcgagctgggcagagcagaagcctacaccttagccttcactgatgagcagtacctggtg
ccaaaggatgggaagccacttcctggcctgatccaggatcacatgatttctggagtcagc
atgacaatccggggctgctttttcaccagagaacagtacatggagctcgtgtaccgaggg
ctgacagacaaaaaaggaagaattaaaacatttcctcctgccattatgaagccacagcga
ttatggacaggaaagcaggttgtttccactttgttaataaacatcattccagacaattgt
gctccactgaatttgactgggaaagcaaaaattggtgggagagcctgggtaaagggacct
gcaagaggatgtctgaatcttgattcaatgtgtgaatctcaggttgttatcagagatggg
gaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatgggcttgtc
cactgctgttatgagatctatgggggtgaagtcagtgggaaagtgctgacgtgtctgggg
cgcctcttcactgcttacctgcagctgtacagggggtttaccatggggattgaagatatt
ttggttaaacctgaagcagaccgcaaaagaaaaaaaatcattgaaaggtcaagacagagt
ggtattgaagctgtcagagctgctcttaatttgccagaagcagcatcgtgtgaggaggtc
caagggaagtggcaggatgcccatctctgcaaagaccagagggatttcaacatggttgat
atgaaattcaaggaggaagtaaacagttacaacaatgaagtcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtgaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggccgaagacccccactgatggcatctggcaaatccctgccatgtttccagccttatgac
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcagaccttct
gaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccggtctgggtacctgcaaaggtgtatcataaaacatttggaaggactggtagttcag
tatgacctgactgtgcgagacagtgatggcagcgtggtgcagtttctgtatggtgaagat
gggcttgacatccctaaaactcagttcttacaacctgagcagtttcctttcattgcagaa
aactacgaggtaatccagaagacaaaccatctggatgaagctctagcaaggatggagtgt
caccaagctaaccagcagttcaaagccatcaaaaagtggcgagccagacaccaaaactct
gtgcaaagaaaaggaggctttctgttgttttcccaaaagaaattggcaagtttgaaagca
cagcttccaggaggtgaaataaagaatggaagagatcctgctacattacagttgttgaag
atgtggtatgagcttgatgaaaagaaacgaaggaagtatctgaagaagacagataagtgt
cctgaccccagccttggggtttggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaatggagttgaaggctatatcaataaatggcaatctgagagcagctggagttac
atgcacccagcactttcttctgatagattaaagaatctgttgtatttaaagtggcagcgt
tctctttgtgacccaggagaagctgtggggcttcttgctgctcagagtattggggaacct
tcaacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgcgggaaatactgatggtggccagctcaaacattaaaacacca
atgatgagtgttcctgtgctcaacaccaagaaagctttcaagaagatgaaacatcttaag
aaacagctcacaagagtgtgcttagctgaggtcttgcagagagtggacatcgaggaatcc
ctgcatgtgaaaaacaagctgaacaagcatcgcctctacaaaatcaaattccaattcttg
ccccatgaatattatcgagaggagaagtgtgtgaagcccaggcagatcttacacttcatt
gaaacaaggttctttaaagttcttctggaagcaattaaaaagaagactacaaagatggca
tcttttaatgaagtcagcactcggaagacaactcggaaggatttagatgatgaacaagac
aagacacagaataatctggaagctgtagcagaggaagaagagaacattgttgatgcagaa
gttgatgaaggagatggtgatgctacagaaaaaaagcggaggaagaaccaggaggaagag
gttgattatgagagcgaagaggagaacgaggaagaaaacgttaatgagaatgcagaagat
gaagaggctgaatctggaaaagaagagactgatggtgctgaagaggatcagagcagagca
gagggtgaagattctcagcatctttcctttgtgtctcagactaaaaaagggaaagatgga
ttgcttcagtcagcagaggtgcgagtgaacgctgttgtggagagccacccatccatacag
gattacacgtttgacactgaaaatgagctttggtgtgaggtttctttggcattgccactg
accaaggtgtactttgacctctcgtccctgctggcgtccctggcgcgcagcacggtgatc
cacgaggtgaagggcatcacgcgctgcctgctgaatgaaagtaccagcaaggagggagag
aaagaattcgttctccagacagaagggataaacctcacagagctcttcaaatactctgat
attttggacctgaatagactttattgcaatgatatccatgccatggctaaaaattatgga
attgaatcagccctgagggtgattataaaggaaataaaagatgtatttgctgtatatgga
attgtggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaaggaatt
tataaaccactgaatcgcattggaattcagtccaactcctcccctctgcaacagatgaca
tttgaaaccagctacaaattcttgaaggaagcaacgatgatgggtgcccacgatgagctg
cgatccccttcggcctgcctggtggttggaaaagttgtcaaaggagggactggcttgttt
gacctcaagcagcccctgacatag
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integrated database retrieval system
