Parus major (Great Tit): 107203533
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Entry
107203533 CDS
T04864
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04010
MAPK signaling pathway
pmaj04020
Calcium signaling pathway
pmaj04144
Endocytosis
pmaj04510
Focal adhesion
pmaj04540
Gap junction
pmaj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107203533 (PDGFRA)
04020 Calcium signaling pathway
107203533 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107203533 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107203533 (PDGFRA)
04540 Gap junction
107203533 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
107203533 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmaj01001
]
107203533 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmaj04090
]
107203533 (PDGFRA)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
107203533 (PDGFRA)
Protein kinases [BR:
pmaj01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
107203533 (PDGFRA)
CD molecules [BR:
pmaj04090
]
Proteins
107203533 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
107203533
NCBI-ProteinID:
XP_015481249
Ensembl:
ENSPMJG00000006373
LinkDB
All DBs
Position
4:complement(42315275..42349682)
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPQTFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGNHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPAVIPCRTSDPDAQVTLVNSLDKPVYALYDTKQGFIG
NFPAGSYTCKTMVKGVEFKSDEFLIYIIRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFVHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALISAL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNMSDIHMEAHLDE
KNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLNRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccacagaccttcttgatcctgggatgttttctcacaggaccattccta
acattttgccagcttcctctgccaaccattgttcccaataggaatgaaatggtggtacag
ctgaattccaatttcacactcaaatgctctggagacagtgaagtgagctggcagtaccca
gtgaccgagggaaaccacaggatagacattagacacgaagaaaacaacagtggcctcttc
gtgacagtgctcgaagtaggaaatgcctcggccgcccatacaggcttgtatgtttgctat
tataaccacacacaagtggaggacggggaagtggaagggaaggacatctacatctacgtg
cctgacccagatatgccttttgttccttctataccagaagaccagttcatcctagtagaa
gaaggtgatcctgcagttattccttgtcggacaagtgacccagatgctcaagtgacttta
gttaacagtttagacaagcccgtgtatgctttatatgacaccaaacaaggcttcataggc
aattttcctgcgggctcatacacatgcaaaacaatggttaaaggcgtggagttcaaatct
gacgagttcctcatctatattataagagctacttcacagctgcctgttgaaattgaagct
cttaaaactgtctacaaaacaggcgagaccatcgtagtaacttgtgtggtctttgacaat
gaggtggttaatttacagtggaattatcctgggaaagtgaaagaaaaaggtctgataaaa
cttgatgatatcaaagtcccatcgcagaagctggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaaggctttgttcacctggagccccag
tttagccctctggaagctgtcaacctgcatgaagtcaaaaactttgttgttgatgtgcag
gcttacccagcaccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
acggagattgttactagttccaacagagtccaggaaacaaggtttcagagtattttaaaa
ttgatacgggccaaggaggaagacagtggatactatactttggttgctgaaaatgaagat
gaaattaaaagatacaccttctcattgctaatacaagttccagctctgatctcagctctt
gtggatgatcaccatggctctgcaggtgggcagacagtgagatgtttggcagaggggacc
ccacttcctgatgtggaatggctggtttgcaaggacattaaaaagtgcagcaatgacacc
tcatggacccttttgactaacaatatgtctgatatacacatggaagcccacctggatgag
aaaaatatggtggaaagccaggtgaccttccagaaggtagaggaaaccctggctgtgcga
tgtgtggcaaggaatgacctcggtgctgttactcgagaactgaagcttgtggctcccacc
ttgagatcagagctgacagtggctgctgccgtcttagtgctgttagtgattgtgataatt
tcactgattgtcctggtcatcatatggaaacagaagccaaggtatgagattagatggaga
gtcattgagtctatcagccctgatggccacgagtacatttatgtggacccaatgcaactg
ccttatgactccagatgggaatttcctcgagatgggttagtgcttggtcggatccttggt
tctggtgcatttggaaaagtagttgaagggactgcatatggattgagtcgctctcaaccg
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggca
ctcatgtctgaactgaagataatgacacatcttggcccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcattactgaatactgtttttatggg
gatttggtgaactacctgcataagaatagggacaatttcctgaaccgacacccagaaaag
cctaaaaaagatttggatatctttgggatgaaccctgctgatgaaagcacaagaagttat
gtgatactatcgtttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgccaatgctggaaaggaaggagggctctaaatactctgatattcagagatct
gtgtatgatcggcctgcttcatataagaagaaatccatgtcagaatcagaagtcaaaaac
cttctttcagatgacagttcagagggcctcagcctactggatttgctgagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgtgtgcaccgtgacttggct
gctcgtaatgtcctcctggctcaaggaaaaattgtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagtacttttctcccagtaaaa
tggatggcacctgaaagtatttttgacaacctgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccatatcctggcatgatg
gtggattctactttctacaataagatcaagagtggataccgaatggccaaacccgatcat
gctaccaatgaagtgtatgagattatggtgaagtgctggaacagtgaaccagagaaaaga
ccgtctttctaccatttgagtgaaattgtggagagcctgctgcctggagagtacaaaaag
agctatgagaagattcatctggacttcctgaaaagtgaccacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtaacttacaagaacgaagacaagctaaag
gacagggagagtggatttgatgagcagaggctgagtgctgacagtggatacatcattccc
ctgcctgacattgaccctgtttctgaagatgagcttggcaaaagaaacagacacagttcg
cagacatctgaagaaagtgccattgaaactggttccagtagctctaccttcatcaagaga
gaggacgagaccattgaggacattgacatgatggatgacattgggatcgactcctcagac
ctggtggaggacagcttcctgtaa
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