Parus major (Great Tit): 107203572 Help Entry 107203572         CDS       T04864                                  Symbol PCDH18 Name (RefSeq) protocadherin-18 isoform X1   KO K16499   protocadherin delta 2 Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:pmaj04515]     107203572 (PCDH18) Cell adhesion molecules [BR:pmaj04515]  Cadherins   Protocadherins    107203572 (PCDH18) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 Syndecan PepSY Cadherin_C_2 G1_gp67_N Motif Other DBs NCBI-GeneID:  107203572 NCBI-ProteinID:  XP_015481314 Ensembl:  ENSPMJG00000000161 LinkDB All DBs Position 4:317887..327262 Genome browser AA seq 1135 aa AA seqDB search MYRIGGKMHFLFIFALIIISCNNAVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKMPN PSLVRFRAMQRGNSALLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL FHVEVEVLDINDNSPQFSRALIPIELSESAAVGTRIPLDSAFDPDVGDNSLYTYSLSAND FFSIDVRTRTDGAKYAELIVVRELDRELKSTYELQLTASDKGVPQRSGSSLLKISISDSN DNSPVFEQQSYIIQLLENSPIGTLLIDLNATDPDEGANGKVVYSFSSHVSAKIIETFRID AEKGHLTLLKQVDYEVTKSYEIDAQAQDMGPNSIPAHCKIIIKVVDVNDNKPEINLNLMS TEREEVAYISEGSPVDTFVALVRVQDKDSGVNGDIICRLHGHGHFKLQKTYENNYLILTN ATLDREKRSEYLLTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVVILENNSP GAYITSVTATDPDLGDNGQVTYTILENSVLGSSITTYVTIDPSNGAIYALRTFDHEEVNQ IAFVVQARDGGSQQLISNTTVVLTIIDENDNAPVIVGPVLRNSTAEISIPKDAEIGFLVT RIRATDRDSGMNSELSCSIADDKENSIFVMDPQTCDISINVSVESVAAKQWEFLVIVQDK GSPQLSTKALLKCTILEHVYSFSSTEATMVSQPSLDISMITIISLGSICAVLLVIMVIFA TRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRASPSS SPALERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPPVEQVSQLLSMLHQG QYQPRPNFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPIDRLLGEGF SDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFQSPQQHL QQQQHHQGLEEDAQAADTGEKKSFSTFGKDCQSEEESGDTCTSSLLSEMSSVFQRLLPPS LDAYMECNEMDRSNSLERRKGHLPTKTVNYPSGVAAWAASTHFQNPANNGPALGTHLGAQ PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN NT seq 3408 nt NT seq  +upstreamnt  +downstreamnt atgtatcgaatcggcggtaaaatgcactttctattcatttttgcactgatcataatatct tgtaataatgctgtgcttggaaagaatttgaagtacaggatttatgaggagcagagggtt ggatcagtaattgcaagactatcggaggatgttgctgatgttttattaaaaatgcctaac ccttccttagttcggtttcgagccatgcagaggggaaattctgccttgcttgtagtccgt gaggataatggagaaatcagcataggagctaaaattgatcgggaacagttgtgccagaaa aacttaaactgctccatagagtttgatgtgatcactctccccactgaacatctgcagctt ttccatgtcgaagttgaagtgctggatattaatgacaactctccacagttttccagagct cttatccctattgagttatcagagagtgcagctgtaggaacacggatccctttggacagt gcttttgatccagatgtgggagacaactccctttacacttactccctttcagcaaatgat ttttttagcattgatgtgagaaccaggactgatggtgctaagtatgcagaactgattgtg gttagagagctggatcgcgagttgaaatcgacttacgaactccaactcactgcctctgac aaaggggtgcctcaaagatctgggtcatccctcttgaaaatcagtatttctgattccaat gacaacagccctgtgtttgagcagcagtcatatattatccagctcttggaaaactctcca attgggactttgctcatagacctcaatgctactgatccagatgagggcgccaatgggaag gtcgtgtactcctttagcagtcatgtatctgccaaaattatagaaacttttaggatagat gcagaaaaaggtcatctgaccctgctgaaacaagtggactatgaagtaaccaaatcctat gaaattgatgctcaggctcaggatatggggccaaattctattccagctcactgcaaaatt ataattaaagttgtggatgtgaatgacaacaagccagaaatcaacttaaatctgatgtcc acagagagagaagaggtagcttacatttctgaggggtcacccgtggacacctttgttgcc cttgtcagagtgcaagataaggactctggtgtgaatggagacatcatttgtaggctccat gggcatggccactttaaacttcaaaagacttatgaaaataactatttaatcctgactaat gccactctagatagggaaaagagatccgaatacctcttgactgtaatagcagaggacaag ggaacaccaagtctttccacagtgaaacactttactgtccaaatcagtgatgaaaatgac aacccaccccgtttccagacaaacagatatgaagttgttatcttggaaaataactctcca ggagcatacatcacatcggtcacagccacagacccagatctaggtgacaatgggcaggtg acatacactattttggagaactctgttttgggaagttctataaccacctatgtgaccatc gatccctccaatggggcaatctatgccctgcgaacctttgatcatgaagaagtaaatcaa attgcctttgtggtccaagctagggatggagggagccagcagctcattagcaacaccaca gttgtactcaccatcattgatgaaaatgacaacgctcctgtcatcgtggggccggtgcta cgcaacagcacagcagaaatatcaatccctaaagatgctgaaattggctttcttgtcacc aggataagggctacagacagagactctggtatgaactctgaactcagctgctctatagca gatgacaaggaaaacagcatctttgtgatggatccccaaacttgtgacatctctatcaat gtgagtgttgaatcagttgcagcaaaacaatgggagtttttggtgatagtccaggataaa gggagccctcagcttagtactaaagctcttctgaaatgtaccattttggagcatgtttat tcattctcaagcactgaagcaactatggtaagccaaccctccctggacatctccatgata acaattatatccttaggatcaatatgtgctgtgttattggttataatggttatctttgct acgaggtgcaatcgagagaaaaaggacaccaggtcttacaactgtcgcgtggccgaatca acctaccagcaccatccaaaacgcccctccagacagatacacaaaggggacatcacactg gtgccaacagttaatggcactctacccatcagatctcatcacagagcttcgccatcatcg tccccagccctggagaggggtcaaatgagcagccggcagagccaccacagccaccaatca ctgaacagcctggtgaccatctcctcgaaccatgtgcctgaaaatttctccctggaactc acccatgctacaccgcctgttgagcaggtttctcagcttctctcgatgcttcaccaaggc cagtatcaaccaaggccaaattttcgaggaaacaaatattccagaagctacagatatgcc ctacaagatatggataaattcagcttgaaagacagtggccggggtgatagtgaagctgga gacagtgattatgatttgggaagagagtctccaattgacagacttcttggggaaggattc agtgaccttttccttacagatgggagaattccagcagccatgcgcctatgcacggaggaa tgcagggtcctgggccactctgaccagtgctggatgccaccgcttccctctccctcctct gactacagaagcaacatgttcatccctggggaggagttccagtcaccccagcagcacttg cagcagcagcagcatcatcagggcctcgaggaggatgcccaggcagctgacaccggtgag aagaagagcttttcaacatttgggaaggactgccagagtgaagaggaatcaggggacacc tgcacctcctccctcctctctgaaatgagcagtgtcttccagcgcctgctgcctccctca ttggatgcctacatggagtgcaatgagatggatcgctccaactcactggagcgcaggaag ggacatttgccaaccaagactgtaaattatccatcgggggtggcagcctgggcagccagc acacatttccaaaaccctgctaacaatgggcccgctctggggactcacttgggcgcgcag ccttcatccaaatggctaccagctatggaggagatcccagaaaattatgaagaagatgat tttgacaatgtgctcaaccacctcagtgatggcaaacatgaactcatggatgccagtgag ctggttgcagaaattaacaagctgctgcaagatgtccggcagaactaa

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