Parus major (Great Tit): 107203682
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Entry
107203682 CDS
T04864
Symbol
PCDH19
Name
(RefSeq) protocadherin-19
KO
K16499
protocadherin delta 2
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107203682 (PCDH19)
Cell adhesion molecules [BR:
pmaj04515
]
Cadherins
Protocadherins
107203682 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
107203682
NCBI-ProteinID:
XP_015481479
Ensembl:
ENSPMJG00000000871
LinkDB
All DBs
Position
4A:1039497..1096524
Genome browser
AA seq
1087 aa
AA seq
DB search
LLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSA
PHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPS
FPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFA
ELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVP
ENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEE
GHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVI
ALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDN
GIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSV
SYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNAT
VRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMV
EGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDA
QESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKS
SKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNV
ESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSTF
KDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQEQSEAFH
CREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCSTKRTFAT
FGKEGGEPPAEERLANPKGKRTMDSAACSPKVSGAVREAGNGCEAVSPITSPLHLKSPLS
GKPGAPYGAGHCAGSREPLGNTGPSRPSEAEPRGADSESSGQEGNPLLQERREKDSPGAR
RLKDIVL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
ctgctgggggccgccttgctgtgggccggcgccggggccctcgtcaacctcaagtactcg
gtggaggaggagcagcgggccggcacggtgatcgccaacgtcgccaaggacgcccgggac
gccggtttcgtgctggaccctcggcagcccgccgccttccgggtggtctccaactcggcc
ccccacttggtggacatcagccccgggtccgggctgctggtgaccaagcagaagatcgac
agggacctgctgtgccgacagagccccaagtgtgtcatctcgctggaggtgatgtccagc
tccatggagatctgcgtgatcaagctggagatcaaggacctaaacgacaatgcgcccagc
ttccccaccgaccaaatcgagctggagatctcggagacggccagccctggcacccgggtg
ccgctggagagtgcctatgacccggactcgggcagctttggtgtgcagagctatgagatc
acccccaatgacctctttgggctggagaccaagacgcggggtgatgggtcccgttttgct
gagctggtggtggagaagagcctggaccgtgagacccagtcccactacagctacgtgatc
acggcgctggatggtggcgacccacccaactttggcacagtggagctcagcatccgcgtc
atcgactccaatgacaacaacccgctctttgaggagccagcctacaccgtcagcgtgcct
gaaaacgccccaccggggacgccagtcatccgcctcaatgcctctgacccggacgagggc
accaacggccaggtcctctactctttccacagctacgtctctgagcgggctcgggagctc
ttccaaatcgacccccagagtggcctcatcacggtgagcggtgccatcgactatgaggag
ggtcacgtctacgagctggacgtgcaggccaaggacttggggcctaactccatccctgcc
cattgcaaagtgaccatcagtgtccaggatgccaacgacaacccgcccctcatcaacctg
ctctctgtcaacagtgagctggtggaggtgagcgagaatgccccaccggggtacgtcatc
gccctggtgcgcgtctcggatcgcgactccggggccaacgggcgcgtgcagtgcaagctc
ctgggcaatgtgccttttcgactccaggagtacgagagcttctccaccatcctggtggat
gggcggctggaccgggagcagagggaccagtacaacctcaccatccaggctagggataat
ggcatcccttccctgcaggccaccaaatccttcactgtcaagatcaccgatgagaatgac
aaccatccccacttctccaagccctattaccaagtcatcgtgcaggagaacaacaccccg
ggggcctacctcctgtctgtctcggccagagaccccgacctgggcctcaatggcagcgtg
tcctaccagatcgtgccctcccaagtcagggacatgcctgttttcacctatgtctccatc
aaccccaactctggagatatctatgctttgaggtccttcaatcatgaacagaccaaggcc
tttgagttcaaggtcttggcgaaagatgggggtaatccctctcttcagagcaatgccact
gtcagggtgattgtcctggatgtgaatgacaacacacccgtgatcacggccccgccgctg
gtcaacgggacggcggaggtgtacatccccaggaacgcgggggttggctacttggtgaca
gtggtcaaggcagatgactatgatgagggtgaaaatggcagactttcctatgaaatggtg
gaaggagacagaggattttttgagatcgaccaggtgaatggagagattaggaccaccaga
gcctttggggagaacgccaaaacagcctatgagctcatcgtggtggctcatgaccatggg
aaaacatctctctctgcttctgccttgattttgatatacctgtctcctgccctggatgcc
caggagtccataggatctgttaacctctccttgattttcattattgccctggggtctatt
gcagccattctttttgtcaccatgatctttgtggcagtcaagtgcaaaagggataacaag
gaaatcaggacctacaactgcagaatcgcggagtactcctacgggcatcagaagaaatcg
agcaagaagaagaaaatcagcaagaatgacatccgcctggtgccgcgggacgtggaggag
acggataaaatgaacgttgtgagctgctcctctctcacttcctccctcaactacttcgac
taccaccagcagaccctgccgctgggctgccgccgctccgagagcaccttcctcaacgtg
gagagccagaacaacaggaacgcgggctccaaccacatctaccaccacaccttcaccggg
cagagcccccagcagcccgacctcatcatcaacggcatgccgctgcccgagactgaaaac
tactcctttgattccaactacgtgaacagcagagctcatttaataaaaagctccacgttc
aaggacttggaggggaacagtctgaaggacagtggccatgaggagagcgaccagacggac
agcgagcacgacgtgcagcggggcctgtactgcgacacggccgtcaacgacgtgctcaac
accagcgtcccctccatgggctcccagggccccgagcaagagcagagcgaggctttccac
tgccgggaggagtgccgcatcctgggccactcggacaggtgctggatgccccgcggtgcc
gtgcccagccgcgccaagtcccccgagcacggccggaatgtcatcgccctgtccatcgag
gccacggcggtggacgcagagccttacgcagactgcagcacaaaaaggaccttcgccacc
ttcggcaaggagggcggcgagcccccggccgaggagcggctcgccaaccccaaaggcaaa
agaacgatggactcggccgcctgcagccccaaggtgagcggcgccgtccgcgaggctggc
aacggctgcgaggccgtcagccccatcacctcgcccctgcacctgaagagccccttgtcc
ggcaagccgggagcgccctacggggccgggcactgcgccggcagccgggagcccttgggg
aacactggcccttcccggccctccgaggcagagccccggggcgcggacagcgagagcagc
gggcaggagggcaacccgctcctgcaggagcgccgggaaaaggactcgcccggcgcccgg
agactgaaggacatcgtcctctga
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