Parus major (Great Tit): 107203689
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Entry
107203689 CDS
T04864
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmaj00535
]
107203689
Proteoglycans [BR:
pmaj00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
107203689
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_R13L1-DRL21
Toxin_11
Motif
Other DBs
NCBI-GeneID:
107203689
NCBI-ProteinID:
XP_033369913
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Position
4A:complement(7867236..7868522)
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AA seq
428 aa
AA seq
DB search
MFFLVIFTFTCAAKAGLSLNVSNSCPSMCKCTPEETILCNRAGLKTLPGEIAASTISLNL
SNNYLRILNTNTFRNLTFLHSLWLDGNNLTFLTPGTFHALSRLQELHLSRNSRLTYLHAN
TFRGLLNLISLDLSHCNIFEIHPLLFSHLPSLERLDLASNNMRYVPQAFRNLSSLTRLSL
EGNHIEAIGRDSLKDLETLYDLNLRRNRIWIIQNGAFAKLLRLGMLNLGHNFITDLPNQL
FEGLIQLKTMHLEANRITAVDCTFRHLLNLRSLYLNNNQISSISDSAFLYLNKLHFLHLS
RNNLSSLPTRSFAELTKLKYVFLSHNPWRCDCSMLWFWHWTATRQAVIQGLDCAFPAPPN
TTAPEEPRPGELGDCTVPLELPREDKCGVAGTSVAPRPPALPGQLILLALACHTWYNERG
WGTVVATF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcttgttatatttacatttacttgtgcagcaaaggctgggctgagtctgaat
gtctccaattcatgtccaagcatgtgcaaatgtacacctgaagagaccatcctctgcaac
agagctggactgaaaaccctacctggagaaatagcagcatccaccatctctctaaacctc
tccaacaattatttgcggattctcaacaccaacaccttcagaaacctgactttccttcac
agcctctggctagatgggaacaatctgactttcctgaccccaggaactttccatgctctc
agcaggctgcaggagttgcacctcagcaggaactcacgcctcacctacctgcatgcaaac
actttcagaggactattaaacctcatcagcctggatttgtcccactgcaatatcttcgaa
atccacccacttcttttttcacacttgccttccttagaaaggcttgatttagcctccaat
aacatgcggtatgtcccgcaagccttcaggaacctctccagcctcacgaggctgtccctg
gagggcaaccacatagaagccatcggcagagattccctgaaggacctggaaaccctgtac
gatctgaatctcaggaggaatcggatatggatcatccaaaatggagcttttgcaaagctt
ctcagattgggcatgttaaatttaggacacaacttcatcactgatttgcctaatcagctt
tttgaaggcttgatccagctcaagaccatgcacctcgaagccaacagaatcacggctgtc
gactgcaccttcagacacctgctcaacttgagaagcctgtacctgaacaacaaccagatc
tcctccatctcagactctgcttttttgtacctaaacaagctgcacttccttcacctgagc
agaaacaacctcagctccctgcccacgcgctcgttcgccgagctgaccaagctcaagtac
gtgttcctgtcccacaacccctggaggtgtgactgcagcatgctctggttctggcactgg
acagccacacgccaggctgtcatccaggggctggactgtgccttccctgccccccccaac
acaacagcacccgaggaaccccgtcctggggagctgggggactgcacggtgccactggag
ctgcccagggaggacaagtgtggggtggctgggaccagcgtggctcccaggccccccgct
ctgcccggccagctcatcctgctggcacttgcctgccacacgtggtacaatgagaggggc
tggggcaccgtggtggccacgttttaa
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