Parus major (Great Tit): 107203791
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Entry
107203791 CDS
T04864
Symbol
PASD1
Name
(RefSeq) circadian clock protein PASD1 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107203791 (PASD1)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107203791 (PASD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
bHLH_IRO3
PAS_9
TED_2
LUZP2
DUF6863
Motif
Other DBs
NCBI-GeneID:
107203791
NCBI-ProteinID:
XP_015481676
Ensembl:
ENSPMJG00000011420
LinkDB
All DBs
Position
4A:complement(12291303..12342806)
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AA seq
833 aa
AA seq
DB search
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELCTMLQGHGHPLKMDKSTILQRTIDFLQK
QKEITAQTEACQIRQDWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLG
HLPSDLVDQNILNFLPEGEQSEVYKLLSPHVLMTDPVAADFLNAEKQIEFCCHLARGSLD
PNEPLMYEYVKFVVDFKYFTDVPTPSCNGFESAIARAFRSATEEQICLVATVRLVMPQFL
KELCNTEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLAR
CHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRA
ERRRDLGLEESSIELASSSLKSHSSYLDVGQCGSSQDASREGVSLSSHSSQHSSHTTLSN
STSTSSLRRTDTSTPTRPSVPGVSGEKTALRLATVRSTQAIAIPQAPGEHLCQHPVAQLA
GPSQNPLMPMYHFPTQLGMMHQLKEQLEERTRILQADIKTQQEELHVIKEQLQLVQDSNM
QMLMQQPIPVILNTVQQPSPRRPPPQGTPRQTTAKKSQQPVLMGTKHYCSTHLLSPHPFL
RDPCGTVPQVQQQKQQHPRGSQGQQLCVPGQASISVPFYNNPMVFSQTHPITVAAQVLTD
SSERQPPADYSQDRSLRMLLDQSIQAMMPTANRNCQPLQSSTSRQQGKLVAEQQTLPPPA
QVQPVTCSTIRPPAPPPIFSPSLMIPHSSFTSHQASTPVHLHQWPQQQVQQHHLYLQMQG
PELVPGAPIQRIFQPSHTPQQNPLSYFLHPQQQSHHTQGQPCNLPDLPEMQLP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagaaggacagggcaaagagggcatcacgcaacaaatctgagaagaag
aggagagaccagttcaatgtcctcattaaagagctttgcacaatgctgcagggccacggc
caccctctcaagatggacaagtccacaatactgcagaggaccatcgacttcctacagaaa
cagaaagaaatcacagcacagacagaagcctgtcagattagacaagactggaagccttca
tttcttagcaacgaggagttcactcagttgatgttagaggcactagatggctttctcatt
gctcttaccactgatgggattattatttatgtatctgatagtgtttcatctctgctagga
cacttgccgtcagatttggtggaccaaaatatattaaactttctgcctgagggggagcag
agtgaggtgtacaagctcctttctccacatgtgctcatgacagatcctgttgcagctgat
tttctaaatgcagaaaaacaaatagagttttgttgccatttagcaagaggcagcttagat
ccaaatgaacccctgatgtacgaatatgtgaaatttgtagtggattttaaatattttact
gatgtgcctacaccttcctgtaacggctttgagtcagctattgcacgagctttcaggtca
gccacagaggagcagatttgcctggtagcgactgttcgtcttgtcatgcctcagttctta
aaggagctctgcaacactgaagagccatgtgaagaatttacatcacggcatagtttagaa
tggaagtttttattcttggaccacagggctccacctattataggatatttaccctttgaa
gttctgggaacatcagggtatgattactaccatgcagatgacctggagcttcttgctagg
tgccatgaacacttgatgcagtttggaaaaggaaagtcctgttactatcggttcctgacc
aaagggcagcagtggatatggctgcagacacactactacatcacctaccaccagtggaac
tccaagcctgagttcattgtttgcactcatctggtagttagttatgcagaagttcgggct
gagagaaggcgagatcttggccttgaggagtcatcaattgaactggcatcctcttctcta
aagagccacagcagctacctggacgtggggcagtgcggcagcagccaggatgccagccga
gagggagtgtcgctgtcatcacacagctcccagcactcctcgcataccaccctctccaac
tccacctccacatcatccttgcggcgcacagacaccagcactcccacccggccgtcagtg
ccgggggtttcaggggagaagacagccctgcggctggcaacggtcaggagcactcaggcc
atagccattcctcaagctcctggtgaacacctctgtcagcaccctgtggctcagctggca
gggccttcccagaaccctctgatgccaatgtaccatttccccacccagctggggatgatg
caccagctgaaagagcagctggaggaaaggactcgcatactgcaagctgacatcaagaca
cagcaagaggagctccatgtcatcaaggagcagctccagcttgtgcaggactcaaacatg
cagatgctgatgcagcagccgatccctgtcatcttaaacactgtgcagcagccgagcccc
cggaggccgccgccgcaggggacacccaggcagaccacagccaagaagtcacagcagcca
gtcctcatggggacaaagcactactgcagcacccacctgctgtcaccgcacccattcctc
agggacccctgtggcacagtcccccaggtacagcagcagaagcagcagcatccaagagga
agccaaggccagcaattatgtgtgccagggcaggcaagcatttcagtgcccttctacaac
aaccccatggtgttctcccaaacacaccctatcactgtggctgcacaggtgctgactgac
agcagtgagaggcaaccaccagctgactacagccaggacaggagcctcaggatgctgttg
gatcagtccatccaagccatgatgcccacagccaacaggaattgtcagccattgcagagc
agcaccagcaggcagcaaggaaagcttgttgcagagcagcagaccctgcctcccccagca
caggtgcagccagtcacctgcagcaccatcagacctccagccccaccacccatcttctcc
ccgtctctaatgatcccacactccagcttcacatcccaccaggccagcacaccagttcat
ctgcaccagtggccacagcagcaagttcagcagcaccacctctaccttcagatgcaaggt
cctgagctggtgcctggggctccgatacaacgcattttccagccatcccacactccacag
cagaaccccttgagctacttcctccatccgcagcagcagagccaccacacacagggccag
ccctgcaacttgcctgacctgcccgagatgcagctgccatga
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integrated database retrieval system
