Parus major (Great Tit): 107203824
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Entry
107203824 CDS
T04864
Name
(RefSeq) transcription factor SOX-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107203824
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107203824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107203824
NCBI-ProteinID:
XP_015481759
Ensembl:
ENSPMJG00000012181
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All DBs
Position
4A:complement(16884746..16886559)
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AA seq
318 aa
AA seq
DB search
MYSMLETEIKAPQPSAGGTGGNPAPGSTGKGTGGGGAGSGAGAGSDQDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYR
PRRKTKTLLKKDKYSLPGNLLAPGGGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQL
GYSQHPGMNSPQLQQMHRYDMTGLQYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSL
GSMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDATDPSSLQGSRLHSVHQ
HYQSAGTAVNGTVPLTHI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggagacggagattaaagcgccgcagccctcggcgggcggcaccggc
ggtaaccccgctccggggagcaccggcaaaggcaccggaggcggcggggccggcagcgga
gcgggagcgggctcggaccaggaccgggtgaagcggcccatgaacgccttcatggtgtgg
tcccgcgggcagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatc
agcaagcgcctcggcgccgactggaagctgctgagcgacgccgagaagcggcccttcatc
gacgaggccaagcggctgcgggccgtgcacatgaaggagtatccggattacaaataccgg
ccccggaggaagaccaagacgttgctgaagaaggacaaatactcgctgcccggcaatctg
ctggccccgggggggggcaacgcggtgagcagccccgtcggggtggggcagaggattgac
acttatgcccacatgaacggctggaccaacggggcttactcgctgatgcaagaccagctg
ggctacagccagcacccgggcatgaacagcccgcagctgcagcagatgcaccgctacgac
atgacgggcctgcagtacagccccatgatgtccacggcccagacctacatgaacgccgcc
tccacctacagcatgtcccccgccgcctacggccagcagccctccacggccatgagcctg
ggctccatgggctccgtggtgaaatccgagcccagctcgccgcctccggccatcgcttcc
cactcgcagagggcctgcctgggagacctgcgggatatgatcagcatgtacctgcccccc
ggcggggatgccacagacccttcctccctgcagggcagcaggttacacagcgtccaccag
cactaccagagtgccgggactgccgtgaatggtaccgtaccactaactcacatataa
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