Parus major (Great Tit): 107204034
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Entry
107204034 CDS
T04864
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107204034 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107204034 (CSTF2)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107204034 (CSTF2)
U7-dependent histone pre-mRNA processing factors
107204034 (CSTF2)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107204034
NCBI-ProteinID:
XP_015482289
Ensembl:
ENSPMJG00000000799
LinkDB
All DBs
Position
4A:complement(972111..978894)
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AA seq
585 aa
AA seq
DB search
MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVAGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
VGRDPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGP
NPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGIPGAGVQGAGQPGGFSPGQSQVTP
QDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggatcggtccctgcgctccgtgttcgtg
gggaacatcccgtatgaggccacggaggagcagctgaaggacattttctcggaggttggg
cccgtggtcagctttaggctggtgtacgacagggagacgggcaagcccaagggctatggc
ttctgcgagtaccaggaccaggagacggcgctcagcgccatgcgcaacctcaacgggcgc
gagttcagcggcagggccctgcgcgtcgacaacgccgccagcgagaagaacaaggaggag
ctcaagagcctgggcacaggtgcacccatcatagagtcaccctatggggaccctgtcaac
ccagaggatgcccccgagtccatcagccgggcagtggccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtccagaacagcccccaggaagccaggaac
atgctgctccagaacccacagctggcttacgcgctgctgcaggctcaggtcgtcatgagg
atcgtcgacccggagattgcgctgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcagccagtggcagggccagggcctgggccaggaccggggcctggg
ccggggcccaacgcgcagctgaacccgcagaacaccccatcgtcccagccacagcccata
ggcgggatgcacgtcaatggcgctcctcctctgatgcagccgcccatgcaggggggagtg
ccagccccaggacagatggcagcccctgtgcagggcccaggccctggccccatggctcca
ggaggtgggatgcagccacaggttgggatgccaggtgcggggcccgtccccttggagcgt
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccacgggggcccttgatggatgctcga
gtcggaagagatcctcgagggctggagccgcgcgggctggagccgcgggtgatggaggcg
cgagccctggaggcgcgaggcctggagccgcgggtcctggagccacgagtgctggaagcc
agggccatggaggccagggtcctggagccccggggcctggagcctcgagggcctggtccc
aacccgcgtggcccgatgcctggtgggatacagggtcctgggccacttaacatgggagcc
agtggcccgcaggggccccgccaggttcctaacatggctggggcaggcattcctggggca
ggagtccaaggagctggtcagcctggaggctttagccctggacagagccaggtcaccccc
caggatcacgaaaaggcagcgctgatcatgcaggtgctgcagctgacagcagaccagatc
gccatgctgcccccagaacagcgacagagcatcctcattctgaaagagcaaatccagaaa
tccacgggggcaccctga
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