Parus major (Great Tit): 107204347
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Entry
107204347 CDS
T04864
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107204347 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107204347 (DIS3)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107204347 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Toxin_R_bind_C
ASPRs
Motif
Other DBs
NCBI-GeneID:
107204347
NCBI-ProteinID:
XP_015482805
Ensembl:
ENSPMJG00000013660
LinkDB
All DBs
Position
1:49898824..49918562
Genome browser
AA seq
964 aa
AA seq
DB search
MLTSRTFVKRTRAGAVVKVVREHYLRDDIACGAAACRLCPPAAPAPTAGSAPGLEARPSG
PASSLCPEPHFLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIQ
NPEKHFYSFTNEHHRETYIEQERGETSNDRNDRAIRVAVKWYNEHLKKIEEEEKIQVIFL
TNDRINKEKALEEGITAYTCEEYIKSLTANPELVDRLACVSDEGKEIEGGKIIFPEHIPL
SKLQQGIKSGIYLQGTYRANRENYLEATVWVHGDAEENKEIIVQGLKHLNRAIHEDVVAV
ELLAKDEWVAPSSVVLQDDGQNEEDIENEEEKENILKTSINKDMMRPTGRVVGIIKRNWR
PYCGMLSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNG
HFVKNLGSAGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLN
VCSVDPPGCTDIDDALHCREIGNGNLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCE
KRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQ
MRIDSATMNDDITNSLRGLNRLAKILKKKRIDNGALTLASPEVRFHMDSETHDPIDLQTK
ELKETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKNLEIK
TDSAKALAESLDKAESPAFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTH
FTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLAEMCKNLNYRHKMAQYAQRASVAF
HTQLFFKTKGVVNEDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPAPKLEYNSEVPSL
TVEDTTLHIFDKVKVNIMLDDSNIQHQKMRMVLVEPKINDVPAHLSAEASSKDEPEKKKK
KLQK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcgtgaagcgcacgcgggcgggcgcggtggtgaaggtggtg
cgcgagcattacctgcgcgatgacatcgcgtgcggcgccgccgcgtgccgcctctgcccc
cccgccgcgcccgcacccaccgccgggagcgcgcccgggctggaggcgcggcccagcggc
cccgccagcagcctctgccccgagccgcacttcctcctgcccgacaccaacctcctcctg
caccagattgatatccttgaagatcctgttattaagaatgtcattgtgctgcagacagtc
cttcaagaagtcaggaatcggagcgcgccagtgtacaagcgaattagggacgtgattcaa
aacccagaaaaacatttctattctttcaccaatgagcatcacagagaaacgtacatagag
caagagcggggagaaacttccaatgaccgcaatgacagagccattcgggtagcagtgaaa
tggtacaatgaacacttgaagaaaatagaggaagaggaaaagattcaagttatcttctta
acaaatgacagaattaataaagagaaagctttggaggaaggaataactgcttatacgtgt
gaagagtatataaaaagcttgacagctaatcctgagcttgtagatcgtcttgcttgtgta
tctgatgaagggaaagaaatagaaggtggaaaaatcatattcccagaacatattcctctt
agcaaattgcagcaaggaataaaatctggtatttacctccaaggaacttacagggcaaac
agagagaattatcttgaagctactgtttgggttcatggagatgctgaagaaaacaaagag
ataattgtacagggactgaaacatttgaaccgagcaattcatgaagatgttgtagctgtg
gagctgttggcaaaagatgaatgggtggcaccgtcctcagtggtcttgcaagatgatggc
cagaatgaagaggacattgaaaatgaagaggagaaagaaaacattctgaagacttcgatt
aacaaggacatgatgaggcccacaggaagagtagtgggcattataaaacgaaactggcgg
ccgtattgtgggatgctttccaagtcacagattaaagaggcaaggcgccatttatttaca
ccagctgatcgtagaattcctcgaattcgaatagaaaccagacaagcagatacattggaa
gggcaaagaatcattgttgctattgacggttggcccaggaattccaggtatcctaatggt
cattttgtaaagaatttgggaagcgctggagataaagagacagagacagaagttcttctg
cttgaacatgatgtccctcaccaggctttttcccaggctgtccttagtttcctaccaaaa
atgccatggagcattacagaagaggatatgaaacacagggaggacttaaggcatctgaat
gtttgtagtgttgatcctcctggttgtacagatattgatgatgcattacattgtagagaa
ataggaaatggaaatctagaggtcggtgtacatattgcagatgtcagtcattttattcgc
ccaggaaatgctttggatgaggagtcagtaaaaagaggaacaacagtgtatctgtgtgaa
aaaaggattgatatggttccagagctccttagttccaacttatgctctctgagatctaat
gtggacaggcttgcattttcatgcatatgggaaatgaaccataaggctgaaattctaaaa
accagatttacaaagagtattattaattccaaggcttctcttacctatgctgaagcacag
atgagaatagattcagcaactatgaatgatgatattactaacagcctacgtggactaaat
agattagcaaaaatcttgaagaagaaaagaattgataatggagccttgacacttgcatca
ccagaggttcgtttccacatggacagtgaaactcatgatcctattgacctgcagactaag
gagctcaaagagacaaattccatggttgaagagttcatgttgcttgccaatatttctgta
gcacaaaaaatttatgatgagttcccagagtttgccttgctccggaaacatcctgctcct
cccccatcaaattatgacatccttgtgaaggctgcaaagtccaagaatttggaaattaag
acagattcagcaaaggctttagctgaatcattagacaaagctgaatctcctgcattcccc
tacctaaacacactgctgcgaattttgaccactcgctgcatgatgcaagctgtttacttc
tgctcgggaatggataatgattttcatcactatggtttagcttcacctatttatactcac
tttacctcacctattagaaggtatgctgatatcatagtccatcggcttttggcagtggcc
ataggagcagacagtacttacccagaactcacagataaacacaaactggcagagatgtgt
aaaaatctcaattatcgacataaaatggcacagtatgcacaaagagcctctgtggcattc
catacacagctgttcttcaaaaccaagggagtagtaaatgaagatgcatatatattattt
gtaagaaaaaatgcgattgtggttctgattcccaagtatgggttagaaggaacagtcttc
tttgaagaaaaagacaaaccagcaccaaaactggagtacaacagtgaggtgccatcactt
actgtggaagacacaacattacatatatttgataaagttaaagtgaacattatgttagat
gattccaacatccaacatcagaaaatgcggatggtcttggtagaacccaagataaatgat
gtgcctgcacatctctctgcagaggcaagcagcaaggatgaaccagagaaaaagaaaaag
aagctacaaaaatag
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