Parus major (Great Tit): 107204456
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Entry
107204456 CDS
T04864
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X5
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107204456 (TNRC6B)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107204456 (TNRC6B)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107204456 (TNRC6B)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107204456 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
107204456
NCBI-ProteinID:
XP_015483083
Ensembl:
ENSPMJG00000007596
LinkDB
All DBs
Position
1A:complement(47841157..47970982)
Genome browser
AA seq
1864 aa
AA seq
DB search
MQTDEGEILEEGSPKVSEMEHEDFVMEGHGKTPPPGEENKQEKEQEREEQLMEDKKRKKE
DKKKKDSAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKRVAVPNGQPP
SAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPSPAAPGANPNNAQPVT
GALLQSDSGTATDSAIGGAAASNYANSTWGPGASSNSGTNANPTHIWDKVIVDGSDMEEW
PCIASKDAESSSENTTDNNSASNPGLEKNALPGSTTSNKGKGSQCQSGSAGNECNLGAWK
SDPKAKSVQSSNPAAESNNGLGNWRNLSGQDRISPGSGFSNFNPNSNPSAWPALVQEGNS
RKGTLESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSL
NLSSPNPMENKGMPFEMGLGNPSRSTDTPSQSTGERKTGSVGSWGTARGSSGTDTVSGQS
NSGNHGNNGKEREDSWKGANVQKPNGSRSDSWDNNNRSTGGGSWNFGPQHTNESKWGEGN
KLTSGVSQGEWKQLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGR
SSSSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSN
TGWGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDVPSQSNQNKSGW
GELSTPTEWKDPKNSGGWNDYKNSNSSNWGGGRQEEKSSSSWNDSSSKDQGWGGRQTNQG
WSSGKNGWGEEVDQTKNSNWESAGNKPVSGWGEGGQNEIGTWGNGANTSSASKGGWDDCK
RTSTWNETGRQPNSWNKQQQQHQQQQQETSGSWGPPPQTPSNGRPPNPNWNSGPQPAAPK
EEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTP
MTSKSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNAMK
SSSKSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTNWGQGGKKTQM
KCALKGGNSDSWMNPLSKQFSNMGLLSQTDDIPGSKMDLSVGGLPDKKFEVDKRAMNLGD
FNDMMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKL
SPSGSTLSNVGLGAIGSGLSPQNFAARQGGNHGLFGNSTAQSRGMHTPVQPLNPSPNIRA
QVPPQFLSPQVSASMLKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQIPQFQLACQLLL
QQQQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQRQPGMKHSPSHPVGPKPHLDS
MVPNPLNVGLSDLQTKGQIPGYGSGGFGSSGMDYGMVGGKEAGTESRFKQWTMMEGLPSV
ASQDANMHKNGAIVPPGKARGGSPYNQFDIIQGDPLSSHAGPAGDSWLPAKSPPTNKIGS
KSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGS
NSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNKMWKNH
ISSRNTTGLPRPPPGLTNPKPSSPWNSTAPRSVRGWGAQDSRLGSASTWSDGGSVRPSYW
LVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYNTKQEAAKAQTALHMCVLG
NTTILAEFATDEEVSRFLAQAQPPTPTATPSAPTAGWQSLETGQNQTDPVGPALNLFGGS
TGLGQWSSGGGGSSGGDLTGASLWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGGG
SDSI
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatgagggagaaatactggaggaaggcagtcccaaggtcagtgagatggaa
catgaggattttgtaatggaggggcatggcaagactccacctcctggtgaagaaaacaaa
caagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagag
gataagaaaaagaaggactctgctcagaaggtcacagatcaaaaaaccaaagtgcccgaa
gtgacgaaaccaagtttaagccaaccagtggctgccagcccaattggcaactctccatcg
ccaccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgcca
agcgccgcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccac
aaagtgttactgaaacgtgggcagccccctccgccatcctgcatgctccttgggggtgga
gcagggcctccctccccagcagcaccaggagcaaacccaaacaacgcacaaccagtgaca
ggagcactgctgcagagcgacagtgggactgcaacagattcagcaattggaggtgctgct
gcttcaaattatgcaaattctacttggggtcctggagcctcctccaacagcggcaccaac
gccaacccaactcacatctgggacaaggtgattgtagacgggtctgacatggaagagtgg
ccttgtattgccagcaaagatgctgagtcttcttccgaaaacaccaccgataacaacagt
gcctcgaaccctggcttggagaagaacgctctgccaggaagcaccactagtaacaaagga
aaaggaagccagtgccagtctggaagcgctggaaacgaatgtaatcttggggcctggaaa
tctgatcccaaggctaaatctgttcaatcttccaaccctgctgccgagagtaacaatgga
ctaggtaattggaggaacttgagtggacaagacagaatcagtcccggttctggcttcagc
aactttaacccaaatagcaacccatctgcttggccagcactggttcaagagggcaattct
aggaaaggaactctggaatctgatagtggtagctccaatgcacagattagcacagtaggt
cagacctctagggaacagcagtcaaagatggaaaatgcgggtgttaactttgtctctggc
agagaacaggctcaaattcataacactgatggaccaaaaaatggaaacactaactccttg
aacttaagttcaccaaaccctatggagaataagggaatgccctttgaaatgggcttgggg
aacccttccaggagcactgacaccccttctcaaagcactggagaaagaaagacagggagt
gttggatcttggggtacagctagggggtcttctggaactgacacagtctctgggcagagc
aattctggaaaccatgggaacaatggaaaggagagagaggactcctggaaaggagctaat
gttcaaaaacctaatgggtcaagaagcgattcttgggataacaataaccggtctacgggt
ggtgggtcttggaactttggccctcagcatacaaatgaaagcaaatggggtgaagggaac
aaattaacatctggggtctctcagggagaatggaaacagctgtctgggtctgatgaactg
aagattggagagtggagtggtccaaaccaaccaaattctagcactggagcatgggacaat
caaaaaggccaccctcttcctgaaaaccaaggtaattcccaggctccctgttggggaaga
tcttccagctctgcgggaagtgaggttggaggtcaaagcactggaagcaaccacaaagca
ggaagtagtgacagtcacaattctggacgccgatcatacaggcctacgcatcctgattgc
caggcagtcctgcagactttgctgagcaggactgacttggacccccgagtgctttcaaac
accggctggggccagactcaaattaagcaagacaccgtgtgggatattgaagaaatgcca
cggcccgaggggaagtctgataaaggaactgaggggtgggagagctctgccacacagaca
aagaactcagggggctggggcgatgtacccagccaaagcaatcaaaacaagtctggatgg
ggtgagctctcaaccccaacggagtggaaggaccccaaaaatagtggaggatggaatgac
tataagaactccaattcttctaactggggaggaggaaggcaagaagaaaaatcatcttcc
tcttggaatgacagctctagtaaggatcaggggtggggtggacggcaaactaatcaagga
tggtcttctggaaagaacggttggggagaggaagttgaccaaacaaaaaacagtaactgg
gaaagtgcaggaaacaagccagtgtccggttggggtgaaggtgggcaaaatgagattgga
acttggggtaatggtgcaaatacaagctctgcttcaaagggtggatgggatgattgtaaa
agaacttcaacatggaacgagacgggtcgacagcccaactcctggaacaagcagcagcag
cagcaccagcagcaacagcaggagacttctggttcctggggtccaccgccccaaactcca
agtaatgggcggcctccaaacccgaactggaacagtggaccacagccagctgcccccaaa
gaggaggagcctagtggctgggaagaaccttctccacagtcaatcagtcgaaaaatggat
attgatgatggcacttcagcgtggggagatcctagcagttataactacaagaatgtgaat
ctgtgggacaagaactcacaaggaggacaggccccacgggagcagagcctgcctactcca
atgactagcaaatcacaagcatcagtctggagcaaaagcactccacctgctccagataat
ggtacgtccgcctggggtgagccaaacgaaaccagtcccgggtggggtgaagtagatgat
acaggagcatcaactacaggctgggggaatgcaccttccaacgccccgaatgccatgaaa
tctagttctaaatctatgcaagatggctggggagagagtgatgggccagtgacaggaaca
cgtcattccagctgggaagaggaggaggagggaggagtctggaacacagcaggctctcag
ggaagcagttcctcccacaactcaacaaactgggggcaaggaggaaagaaaacacaaatg
aagtgtgcattaaaaggaggaaatagtgattcgtggatgaaccctttatccaaacagttt
tcaaatatgggcttgctaagtcaaactgacgacattccaggcagtaagatggacttgtct
gtaggtggtctcccagataagaagtttgaggtagataaacgagccatgaatctcggggat
tttaatgacatgatgagaaaggatcgatctgggttccgtccacctaattccaaagacatg
ggaaccacagatagtgggccttattttgagaagctgactttgcctttctccaatcaagat
gggtgccttggggatgaggctccctgctctcccttctccccttctcccagctacaagctg
tctccctctggttccacactatccaacgtcggccttggggcaatcggctcagggctcagt
ccccaaaacttcgctgctagacaaggtggcaatcatggtttgtttggaaacagcacagca
caatcgaggggcatgcacacaccagtgcagccactaaatccttcccccaatatccgggcg
caagtgcctccccaattcctttctccccaggtttcagcctccatgctcaaacagtttccc
aacagtggcttgaatcctggtcttttcaatatgggcccccagctttctccacaacagatt
gccatgctgagccaacttccacagattccccagtttcaattagcttgtcagctcctcctt
cagcagcagcagcagcaacagctgttacagagccagagaaagttatctcaagctgtgcga
caacagcaggagcaacagattgctcgtatggtgagtgccctccagcagcagcagcagagg
cagcctggcatgaagcattcgccatcccaccctgttgggcctaagccacatttagacagc
atggtacccaatcctttgaatgtgggtctctcagatttacagaccaaagggcagatacct
ggatacggttcaggtggctttggctcaagtggcatggattatggcatggtgggagggaaa
gaggctggaacagaatcccgctttaagcagtggactatgatggaagggctgccctctgtg
gcttcacaagatgccaatatgcacaaaaatggtgcaatagtgccccctggaaaggctcgt
ggaggatcgccctacaaccagtttgacataatccagggcgacccactcagcagccacgca
ggccctgctggtgatagttggttacctgccaaatctccaccaacaaacaagatcggaagt
aaatccagcaatgccagctggcctccagagttccaaccgggagtgccatggaaaggtata
caaaacattgaccctgaatctgacccctatgtgacccctggaagtgtgctgggggggaca
gccacatctcccattgtagatactgaccaccaacttctgcgggacaacaccacagggtct
aattcttccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctctgac
aattccttcaccaacgttcatagcacttcagcaaaattcagtgattacaaatcaacatgg
tccccagatcccataggacacaatcccactcatctctccaacaagatgtggaaaaaccat
atttcctcaaggaacactacagggctgccccgcccacctcctggcctgaccaaccccaaa
ccgtcatctccatggaacagcacagcaccccgatcggtcaggggctggggggcacaggac
tcaaggcttggctctgcatctacttggagtgatggtggctcagttcgtcctagctactgg
ctggttcttcacaatctcactccacagattgacgggtcaaccttgaggacgatctgcatg
cagcatggcccactgctgacattccatctgaacctgacccagggcaccgccctcatccga
tataacaccaaacaggaggcggccaaggcccagactgcactgcacatgtgtgtgttggga
aacactaccatcctggctgagtttgccacagatgaagaggttagtcgctttttggcacaa
gctcagccccctacacctacagcaaccccgagtgcacccacagcaggctggcaatccctg
gagacaggacagaaccagacagatccagttggacctgctttgaatctctttggtgggtca
acagggcttgggcagtggagcagtggtggcggcggcagcagtgggggtgatctcactggc
gcttcattgtgggggcccccaaactattcttcaagcttgtggggggtcccaagcgtagag
gatccacacagaatgggcagccctgctcccttactacctggagaccttctgggaggaggg
tcggattcaatctga
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integrated database retrieval system
