Parus major (Great Tit): 107204479
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Entry
107204479 CDS
T04864
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107204479 (DDX17)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107204479 (DDX17)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107204479 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107204479
NCBI-ProteinID:
XP_015483147
Ensembl:
ENSPMJG00000007832
LinkDB
All DBs
Position
1A:48682191..48701832
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AA seq
655 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGESYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttcggggaccggggccgcgaccgagaccgcggcgggtttggagcaagtcgt
ggaggtcctcttcctccaaagaaatttggtaatccaggggaacgtttacgtaagaaaaaa
tgggatttaaatgaactgcccaagtttgagaagaatttttatgtggaacatccggaagtg
gccaggcttactccatatgaagtcgaagaattgcgaaggaagaaggagataacaattcgg
ggaatggagggctgccccaagccggtgtttgccttccaccagtgtagctttccacagtat
gtgatggatgccttgatggaccagaactttacagaacccactccgattcagtgccaaggc
tttccactagccctcagcggtcgtgacatggtgggcattgcacagaccggctctgggaag
acactagcatacttgttgcctgcaattgttcacatcaaccaccagccatatttggagaga
ggggatggcccaatttgtctggttctggcacctactagagagttagcccagcaagtgcag
caggtggctgatgattatggcaaatgttcaagactgaagagtacctgcatatatggagga
gcacccaaaggtccccagatcagggatttagaaagaggtgtggagatctgcattgctaca
ccaggtcgcttgattgacttccttgaggctggaaagaccaaccttcgtcgctgtacatac
ctggtgctggatgaagctgacagaatgttggacatgggatttgaaccacaaatccgtaaa
attgttgaccagataaggcctgaccgccagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgctgaggacttcctgcaggactatgttcagatcaatgtgggaaac
ctggagttaagtgccaaccacaatatcctgcagatagtggatgtttgcatggaaagcgag
aaagaccataaactgatacagctgatggaagaaatcatggcagagaaggaaaataagact
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccagaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagacgtggaagatgttaaatttgtgataaactacgactatccgaacagctccgaagat
tacgtgcaccgtattggccgtaccgcacgtagtaccaacaaaggtactgcctacaccttc
ttcacaccaggaaacctgaaacaagccagggagcttatcaaagtcttggaagaagccaat
caagccatcaatccaaagctgatgcagcttgtggaccacagaggaggaggaggtggtggt
ggaggaggtcgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtggtgaaagttatgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattctgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccacagctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcgggccagcagccacagccgctcatgtca
caacagtttccacagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtacccgccccctcccccgcccccgcccccctcccgcaaatga
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