Parus major (Great Tit): 107204702
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Entry
107204702 CDS
T04864
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmaj01001
]
107204702 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107204702 (TRIM24)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107204702 (TRIM24)
Protein kinases [BR:
pmaj01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
107204702 (TRIM24)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107204702 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
PHD-1st_NSD
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107204702
NCBI-ProteinID:
XP_015483782
Ensembl:
ENSPMJG00000009335
LinkDB
All DBs
Position
1A:complement(58099950..58155688)
Genome browser
AA seq
1050 aa
AA seq
DB search
MEEAAAALAAAAAVGASGGPCPADRPGAASAAAPLSGENEAESRQGPAESGGDAAPLNLL
DTCGVCGQPIQSRRPKLLPCLHSVCQRCLPQPDRYLMLPPVLTPAAAAALKEPPPAAPPS
SPVSSQASPLHCTPIGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCE
DNAEAHGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHK
KEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIETLITKLMEKTKYIKYT
GKQIQNRILEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLETLAKEHRMKLLQQQQ
EVAGLSKQLEHVINFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDPSPVTNNTIQFH
CDPSFWAQNIFNLGSLVIEDKETPPHMPKSPVMEPNLQPPGSLPPNQLSKFPTQISLAQL
RLQHMQQQVMAQRQQAQRRAGPVVLPNTRMPGAMQQPPASHQAPPRLIHFQNHGPKPNGS
ALPAQQMRFPQNQNLPRPAVKPNPLQMAFLAQQAIKQWQISSGQTSTTPSTASSTTSTPS
SPTVTSAGCDGKNYGPPVIDLSSPVGSSYNLPSLPDIDCSGNITLDNAVRKDGTVEQNQP
KPPSNRTVQSPNSSVPSPGLSGGISVTNVHPPVRSPSASSVGSRESSGSSSRPPGADSTH
KVPVVMLEPIRIKQESSASDENFDFPIVVVKQEAEEESRPRNSILTSLLLDTNHNSTSDE
AMLRTAAPDSTDDQPGVLQESTFPGKTGWMGSSHAGEGRKEDDPNEDWCAVCQNGGKLLC
CEKCPKVFHLSCHVPTLMSFPSGEWICTFCRDLSKPEVEYDCDKPAHSSEKRKLEDTMGL
APIDRRKCERLLLYLYCHEMSPAFQDPVPPTVPDYYKIIKKPMDLSTIKKRLEVTNSFYT
KPEDFVADFRLIFQNCAEFNEPDSEVADAGMKLEAYFEDLLRNLYPERKFPVQPNSQSEK
DNPELNDDSDDDFVQPRKKRLKGEERQFLK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcggcagcggcgttagcagcagcggcggcggtgggggcgtcgggggggccg
tgcccggcggaccgaccgggggcagcgtcagcggcagcgccgctgagcggggagaacgag
gccgagagccggcagggcccggcggagagcggcggggacgcggccccgctcaacctgttg
gacacttgcggcgtgtgcggacagcccatccagagccggcggcccaagctgctgccctgc
ctgcactcggtgtgccagcgctgcctgccgcagcccgaccggtacctcatgctgcccccc
gtcctgacccccgcggccgccgccgccctcaaggaaccgccgccggcggcgcctccctcc
tcgcccgtctcttcgcaagcctcacctctgcactgcacgcccatcggtgttatccgctgt
ccaatttgtggtcaggaatgtgcagagagacacatcatagataacttttttgtgaaggat
accacagaggttcccagtagcacagtagagaaatcaaatcaggtctgcacaagctgtgaa
gacaatgcagaagcccatgggttttgtgtggaatgtgtagagtggttgtgcaagacctgt
atcagagctcaccagagggttaaattcacaaaggatcatactgtgaggcagaaagaggaa
gtatctccagaggcagttggtgtgaccagtcagcgaccagtgttctgcccttaccacaaa
aaggagcagctgaagttgtactgtgaaacctgtgacaagttgacctgccgagactgtcag
ttgctagagcacaaagagcacaggtaccagtttatagaagaagcttttcagaaccagaag
gttatcattgagacactgatcaccaaattgatggagaagactaagtacataaaatataca
gggaaacagatccaaaacagaattcttgaagtgaatcagaatcaaaagcaggtggaacag
gatattaaagttgccatatttacactgatggtagaaataaataaaaaaggaaaagctctg
ctgcatcagttggagactctggccaaagagcataggatgaaacttctgcagcaacaacag
gaagtggcaggtctctctaaacagctggaacacgtcataaatttttccaaatgggcagtt
tccagtgggagcagcacagcactgttgtacagtaaacgcttgattacatatcgactacgg
tatcttctccgagcaaggtgtgatccttccccagtgactaacaataccatccagttccac
tgtgatcctagcttctgggctcagaatattttcaatctaggttctttggtaattgaagat
aaggaaactccaccacatatgcccaagagccctgtgatggaaccaaacttacagccacca
ggcagcttacctcccaaccagctctccaagttcccaacacagatcagcctagctcagctc
cgcctccagcacatgcagcagcaggtcatggctcagagacagcaagctcaacgcagagca
ggaccagtagttctaccaaacaccagaatgccaggagccatgcaacagcctcctgcttct
catcaggcacctccacgcttgattcattttcagaatcatggtcccaagcccaatggttca
gctcttcctgcacaacagatgagatttccccaaaatcagaacttaccaaggccagcagta
aagcccaacccactgcaaatggcattcttggcccagcaagctataaaacagtggcagatc
agtagtggacaaacttcaaccaccccttcaactgcaagcagcacaacatcgactccatcc
agccccacagtcaccagtgctgggtgtgatgggaagaattacggtccccctgtgatagat
ttgagttccccagtgggtagctcctataatctgccatctctccctgatattgattgttca
ggaaacatcacactggataatgctgtaaggaaggatggcactgtagagcagaatcagcca
aaacccccttcaaacaggactgtgcagtcaccaaattcctcggtaccatccccaggcctc
tcaggaggaatcagtgtgacaaatgtacaccctccagttcgttcacccagtgcctccagt
gttgggagcagagagagttctggctcgtccagcaggccaccaggagctgattctacccac
aaagtccctgttgttatgttggagccgatccgaattaaacaggagtcaagtgcatcagac
gagaactttgatttcccaatcgttgtagtgaagcaagaggcggaggaggaatcccggcct
cggaattccatacttacttccttgctgctggataccaatcacaattccacttctgacgaa
gctatgctaagaacagctgcaccagacagcacagatgaccagccaggggtactgcaggag
agcacatttcctgggaaaacaggatggatgggctcctcccatgctggcgagggcaggaaa
gaggatgatcccaatgaagactggtgtgctgtatgtcaaaatggagggaagctcctttgc
tgtgagaagtgtcccaaagtattccatctttcttgtcatgtcccaacactgatgagcttt
ccaagtggagagtggatttgtacattctgtcgggatttgtccaagccagaagttgaatat
gactgtgataaacctgctcacagctctgaaaaacgaaaattggaagacaccatgggtttg
gcacccatagaccgcaggaagtgtgaaagactgctgctatacctctactgtcacgaaatg
agtcctgcctttcaagatccagttcctcccacagtcccagattattacaaaataatcaaa
aagcctatggacttgtcaaccatcaagaaaagacttgaagtgaccaattcattctacaca
aaaccagaagattttgtggctgatttcagactgattttccaaaactgtgctgaatttaat
gagcctgattcagaagtggctgatgctggcatgaaactcgaagcctactttgaagatctt
ctaaggaatctttatcctgagaggaagttccctgtacagccaaacagccagagtgaaaaa
gataatccagaacttaatgatgattcagatgatgactttgtacagccccggaaaaaacgc
ctcaaaggagaagagcgtcagttccttaaatga
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integrated database retrieval system
