Parus major (Great Tit): 107205122 Help Entry 107205122         CDS       T04864                                  Symbol CAPRIN2 Name (RefSeq) caprin-2 isoform X5   KO K18744   caprin-2 Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmaj03019]     107205122 (CAPRIN2) Messenger RNA biogenesis [BR:pmaj03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Other mRNA localization factors      107205122 (CAPRIN2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Caprin-1_C Caprin-1_dimer C1q Motif Other DBs NCBI-GeneID:  107205122 NCBI-ProteinID:  XP_015484816 Ensembl:  ENSPMJG00000008948 LinkDB All DBs Position 1A:complement(54392359..54425162) Genome browser AA seq 1115 aa AA seqDB search MVQLSQAPFHRPSSPSGRSEEGEEKRMKAAKQQVTPTGESPAPASPLQSALSTAASPSQA YETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKKGETLNQDQLEAVEKYDEVVHNLEFA KELQKTFSGLSQDLLKAQKKAQRRESLLKLEAEKKKLRTILQVQYVLQNFTQEHVQKDFK GGVNGAIYLPSKELDYLIRFAKLTCPERNENLRVEDQMEQSSLYFWDLLEGSEKPVVGTT YKHMKDLLSKLLDSGYFESIPTPRTTVPVKELEEVNRKPEKTRQLSKGESAKEPESIMEL MKSEIQPQEFLNRRYLPEAEYSVKKKPEEPRSWEAECAKKKEPPKSWEMLVDIKEQEQKQ ETLKPWEARAKEEEQKRQSAKSWETRVEEEQQKKLDAPKAWVARVQEEQESPKPWVAKVR EEQDLKKQESPKPWVTKVREEQEQKKQESSKPWVTKAKEEPEEKQESPKPWVTQTREQPE QKKPDPMKTWEVPVREEPEQKKQEPMKAWAAHVREEPEQKKQETREAWEKADRQQQVSSP QLQNPPKSWAAASMGPKEQMGPKKFDMEPKEVPKPVHQPAAEFCSTSTLPKDPVLRREKL QDLMTQIQGTYNFMQESILDFDKASPSAIGSSQPPSVTPASSPVASKEQKLPSQSDFLQQ PLKAAASSMVLHGSNTSLASADHALSGSETEDLVTPQATVPLPSEPQSPLPTSSTPVPSV PPAQSFQSPPASSSSVTITAAPFQAMQTVFKVNAPLPPRKDQEVKEDSLSAGYNQSFSTA STQTPPQCQLQSSHVAEQTSLSQESLSSAVNYQPDGAVPVSNGSLAFYPAQANVIPRPPQ PYLNSRGSVRGSARGGRSLANSYRSPGGYKGFDVYRGSPSLPNGNYGQLQFPGRDYAGMP YSQRDVNYQQCYKRGGISSGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSITP VDMPVTSQAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDI QLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVL QLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD NT seq 3348 nt NT seq  +upstreamnt  +downstreamnt atggtgcagctttcccaggcccctttccatcgtccatcatcaccttcaggccggtcggag gaaggggaggagaagaggatgaaggcggccaagcagcaggtgaccccgactggggagagc ccggctcccgccagccccctgcagtccgcgctgagcacggcggcctctccttcccaagcg tatgagacctacatcgacaacgggctcatctgcctcaaacacaagatcaggaacatcgag aaaaagaagctcaaactagaagactataaagatcgtctgaagaagggagaaaccctcaat caagaccaattggaggcagtagagaaatatgatgaagtggtgcacaacctggaatttgcc aaggagcttcagaagactttttcgggacttagccaagatctgctgaaagcacagaagaag gctcagcggagagagagtctattgaagcttgaagcagaaaagaaaaagctgcgtacaata cttcaagtccagtatgtgctgcagaacttcactcaagaacatgttcagaaagatttcaaa ggtggtgtgaatggtgcaatatacttgccttctaaagaattagactacctcataagattt gcaaaactgacgtgtccagagagaaatgagaacttgcgtgtcgaagaccagatggaacaa tcatctctttacttctgggaccttctagaaggaagtgagaaacctgtggttggaacaaca tataaacacatgaaggacctgttatccaaacttctagactctggctactttgaaagtatt ccaactcctcgcaccactgtgccagttaaagaattggaagaagtaaatagaaaacctgag aaaacaagacagctgtcaaagggagagtctgccaaagaaccagaatccattatggagctt atgaaatctgaaatacagccacaggagtttctcaacaggcgttatttgcctgaagcagaa tactctgtcaagaagaagccagaagagcccagatcttgggaagccgagtgtgctaaaaaa aaagaacctccaaagtcctgggagatgcttgttgatattaaagagcaggagcagaaacaa gagaccttaaagccttgggaagctcgtgctaaagaggaggaacagaagcgtcagtctgcc aagtcctgggagacccgtgtggaggaggaacaacaaaagaagctggacgctccaaaggca tgggtagcacgtgtccaagaggagcaggagtctcccaaaccctgggtagcaaaggtcagg gaagagcaggacctgaagaaacaggaatcacctaagccatgggtaacaaaagttagggaa gagcaggaacagaaaaagcaggagtcctcaaaaccttgggtaaccaaagctaaggaagaa ccagaagaaaagcaggaatctccaaaaccttgggtaacccaaactagggagcaaccagaa caaaagaagccagaccctatgaaaacatgggaagtgcctgttagggaagagccagagcaa aagaagcaggagcctatgaaggcttgggctgcacatgttagggaggagccagaacaaaag aagcaggagactcgagaggcttgggaaaaagctgacaggcagcagcaagtgtcatcaccg cagttacagaaccctccgaagtcctgggcagctgccagtatggggccaaaggaacagatg gggccaaagaagtttgatatggaacccaaagaagtgcctaaacctgtacatcagccagct gcagaattttgttctacttcaactcttccaaaagatccagtattgagaagggaaaaactt caggatctgatgactcagatacaagggacttacaacttcatgcaagagtccattctggat tttgataaagcttcaccaagtgccattggttcatcccaacctccttcagttactccagca agtagtcctgtagcttcaaaagagcagaaactgccaagtcagagtgattttcttcaacag ccccttaaggctgctgcttcatccatggtgctgcatggttcaaacacttccctggcatct gctgatcatgctctttctggctctgaaactgaagacttggtgacaccacaggcaactgtt cccctcccaagtgagccacagtcaccattgcctacttcaagcacccctgtgccatcagtg ccaccagcacaaagctttcagtctcctccagcaagcagcagttctgtcacaataacagca gctccctttcaggctatgcagactgtatttaaagtgaacgcaccattgcctccacgtaaa gaccaagaagttaaagaggattctttatcagcgggatataatcagagtttctccacagca agtacacagactcctcctcaatgccagttgcagtcttctcatgttgcagaacaaacctct ctttcacaagaatctctgtcttcagcagtgaactatcaacctgatggagctgttcctgta agcaatggtagccttgccttttatccagcacaggctaatgttattcccagacccccacag ccttacctcaacagtcgtgggtctgtcagagggtctgctagaggtggaaggtcactggct aattcataccgctcccctggtggttacaaaggttttgatgtttacagaggttcaccttca ttacctaatggcaactatggccagctacagtttcctggtagagattatgctggaatgcca tattctcagagggatgttaattaccagcagtgctataaacgaggtgggataagtagtggt cctcgagcaaattcaagagcagggtggagcgactcctcccaggtgagcagcccagaacga gataatgagacctttaacagtggggactctgggcagggagactcccgcagcatcacccct gtggatatgccagtgaccagccaggctgccaccatactcccagtgcacgtctacccactc ccacagcagatgagggttgccttctctgcagctcgaacatccaacctggcccctggaact ctagaccagcccattgtgtttgacctgttgctgaacaaccttggagaaacttttgatatc cagcttggtaggttcaactgtccggtgaatggtacctatgtcttcatcttccacatgctg aaactggctgtaaatgtccctctgtatgtgaatctcatgaagaatgaagaggtccttgtg tcagcatatgcaaatgatggggctcctgaccatgaaacagccagtaaccatgcagtcctg cagctgttccagggagatcagatctggctacggctgcatcggggagccatctatggaagt agctggaaatactccaccttttcgggatacctcctttatcaggactaa

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