Parus major (Great Tit): 107205589
Help
Entry
107205589 CDS
T04864
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107205589 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaj01002
]
107205589 (CAPN3)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
107205589 (CAPN3)
Peptidases and inhibitors [BR:
pmaj01002
]
Cysteine peptidases
Family C2: calpain family
107205589 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
EH
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
107205589
NCBI-ProteinID:
XP_015485631
Ensembl:
ENSPMJG00000014785
LinkDB
All DBs
Position
5:25799554..25826671
Genome browser
AA seq
809 aa
AA seq
DB search
MPTAINAAVAQQTAAGSVPSATIGTTEGAGGGTGGIYSAIISRNQPIISVKEKTYEELHK
KCLEKNVLYEDPDFPPNESSLFYSQKSPVKFEWKRPREICENPRFIIGGANRTDICQGEL
GNCWFLAAIACLTLNKKLLCRVIPHDQSFIQNYAGIFHFQFWRYGDWVDVVIDDCLPTYN
NQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAPK
DIYKIMKHAIDRGSLMASSIDDDLGFSYGSAPGSNIGELIARMVKNQENAQMTQSTVDYQ
GMEERPAWTIVPMQYETRMSCGLVKGHAYSVTAVEETVFKGEKIRLVRLRNPWGQVEWNG
AWSDKSEEWDSVNEAEKIRLQHKVVEDGEFWISFQDFMRHFTKLEICNLTPDTLEVDKFQ
TWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLKLLEEDDDPEDEEVICSFLVALMQK
NRRKERKLGANLYTIGFAIYEVPKEMHGTKHHLQKDFFLYNASKARSKTYINMREISERF
RLPPSEYVIIPSTYDPHQEGEFILRVFSEKRSLSEEVENTIEAERPLKKKGKPIIFVSDR
ANSNKELTADENAGKDGEKTKADDKKRSSAKAHEESEEQKQFRNIFRQIAGDDMEINAEE
LRNVLNNVVKKHKDLRSEGFELESCRSMIALMDTDGSGKINFDEFRHLWDKIKSWQKIFK
RYDTDHSGTINSYEMRNAVNDAGFRLNNQLYDIITMRYANKNMNIDFNSFICCFVRLDAM
FRAFHAFDKDGDGIIKLNVLEWLQLTLYA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgccataaatgcagcggtggctcagcaaacagctgctgggtcagtccccagt
gccaccattggcactacggagggagcaggagggggcacaggggggatttattctgccatt
attagtcgcaatcagcccattatcagcgtcaaggagaagacctatgaagagcttcacaag
aagtgcctggagaaaaatgttctctatgaagatcccgatttcccaccaaatgagtcgtca
cttttctacagccagaaaagccccgtcaagtttgaatggaaaagaccccgtgaaatctgt
gaaaatccacggtttattattggtggagccaacagaacagatatctgccaaggagaacta
ggtaactgctggtttctggctgccattgcttgcctgacactgaataaaaaactactctgt
agagtcatacctcacgaccagtccttcatacaaaactatgctggtatctttcacttccag
ttctggcgctatggagactgggtggatgtcgtcatcgatgactgcttacccacctacaac
aaccagctggtcttcaccaagtcctcccagcgcaacgagttctggagcgccctcctggaa
aaggcctatgcaaaactccatgggtcatatgaagctttgaagggaggcaacaccaccgaa
gccatggaggacttcaccggaggagtcacagagttctacgagataaaggatgcccctaaa
gatatctataaaatcatgaaacatgccattgacagaggctccctcatggccagttccatt
gatgatgacctaggattttcctatggatcagctcctggaagcaacattggagaactgatt
gctcgcatggtgaagaatcaagaaaatgcccagatgactcagtccactgtagactaccag
gggatggaggagaggccagcctggaccatagtgcccatgcagtacgagacacggatgtcc
tgcgggctcgtcaaaggccatgcctactccgtgacggccgtggaagagacagtatttaaa
ggggagaaaatacgtctggtaaggctgagaaacccctggggccaggtggaatggaatgga
gcctggagtgacaagtcagaggagtgggactctgttaatgaagcagagaaaatccgcctg
cagcacaaggtcgtggaagatggggagttctggatatcatttcaagatttcatgaggcac
ttcacaaagcttgagatctgtaacctcacacctgatactctggaagtggataaattccag
acctggactgtgtcagtcaatgaaggacgctgggtgagaggctgttcagctggaggttgc
cgcaattatccagatacattttggaccaatccccagtatcgcttgaagctcctggaggaa
gatgatgatcctgaggatgaagaggttatctgcagcttccttgttgcactgatgcagaaa
aacaggaggaaagagcgcaagctgggagccaacctgtacaccattggctttgccatctat
gaggtgcccaaagagatgcatggtaccaagcaccacttgcagaaggattttttcctctac
aatgcctccaaagctagaagtaagacttacataaacatgcgagaaatctctgagcgcttc
cggttacctcccagcgagtacgtcatcatcccatcgacatatgacccccaccaggaggga
gaattcatcctcagggtcttctcagagaaaagaagtctttcagaggaggttgaaaacacg
attgaggcagagcgtcctttgaagaaaaagggcaagcctatcatcttcgtttctgacaga
gcgaacagcaataaggagctgacagcagatgaaaatgctggcaaagatggtgaaaaaacc
aaagcagatgataaaaagcgttcttcagcaaaagctcatgaggagagtgaggagcaaaaa
cagttcaggaatattttccgacagatcgcaggggatgacatggagatcaatgctgaggaa
cttaggaatgttctcaataatgtcgtaaaaaaacataaggacctaaggtcagaagggttc
gaattggagtcctgccgcagcatgattgccttaatggatacggatggctcagggaagata
aactttgatgaatttcgacacctctgggacaagattaaaagctggcagaaaattttcaag
cgttatgacacggatcattcaggaaccattaacagctatgagatgcgcaatgcagtcaat
gatgcagggtttcggctgaacaaccagctctacgacatcatcaccatgcgctacgccaac
aagaacatgaacatcgacttcaacagcttcatctgctgctttgtgcgcctggacgccatg
ttccgggcattccacgcctttgacaaagatggagatggcatcattaagctgaatgtccta
gagtggctgcagctcacgttgtacgcgtaa
DBGET
integrated database retrieval system
