Parus major (Great Tit): 107205627 Help Entry 107205627         CDS       T04864                                  Symbol DICER1 Name (RefSeq) endoribonuclease Dicer   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:pmaj03036]     107205627 (DICER1) Chromosome and associated proteins [BR:pmaj03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     107205627 (DICER1)    microRNA pathway     RISC loading complex      107205627 (DICER1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Dicer_platform Dicer_dsRBD Ribonuclease_3 Dicer_PBD Ribonucleas_3_3 Dicer_dimer PAZ ResIII DEAD Helicase_C Cas3-like_C_2 Amidoligase_2 DSRM_2 Motif Other DBs NCBI-GeneID:  107205627 NCBI-ProteinID:  XP_015485719 Ensembl:  ENSPMJG00000016959 LinkDB All DBs Position 5:complement(47424840..47491933) Genome browser AA seq 1921 aa AA seqDB search MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT IVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK VGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLA IQDHPYREIMKICEDYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL VVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLMELDEALAFLNDCNISVHSKERDSTLISK QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT GHGIGKNQPRSKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDANETE TEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI EKSEARTGIPNTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV GVKSLPADFRYPNLDFGWKKSIDSKSFISLPNSSVVENENYCKHSTIVVPENAAHQGANR TSSAENHDQMSVSYRTLLNESPSKLQIDVSVELAAINGVSYNKNLANGNCDLVNKDFCQG NQLNYCRQEIPVQPTTSYPIQNLYNSENQPKPSNECTLPSNKYLDGNANRSTSDGCPIVA VTTSTSKAINLSKDRADSEKSPCSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN WLPPGYIVNQDKSNTDKWEKDEMTKENMLANGKLDDYNDDEENEDLMWRLPKEETDFEDD FLEYDQEHIKFIDNMLMGSGAFVKKISLSHFSTTDSNYEWKAPKKSSVGNVQCSSDFDDF DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIAD CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGTLCATAENCNSEQKNHSPNS VSASVANSEPSLCKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKA YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEED IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN S NT seq 5766 nt NT seq  +upstreamnt  +downstreamnt atgaaaagccctgctttgcaatccctcagcatggcgggactgcagctcatgacccctgct tcctccccaatgggtcctttttttggactaccatggcaacaagaagcaattcatgataac atttacacaccaagaaaatatcaggttgaactgcttgaagcagctttggatcataataca atagtctgcttaaacactggctcagggaagacttttattgcagtactactcactaaagag ctgtcctatcagatcaggggagatttcaacaaaaatggaaaaagaactgtgttcttggtc aactcagcaaatcaagttgctcagcaagtgtcagctgtcaggacacattcagaccttaaa gtgggagagtattcaagtttggaggtaactgaatcatggacaaaagagaagtggagtcaa gaattctctaagcatcaggttctggttatgacgtgtcatgttgctttgactgttttgaga aacgagtatttatccctgtcaaatattaatcttctggtgtttgatgagtgccatcttgca atccaggatcatccataccgtgaaattatgaagatctgtgaggattatccatcatgtcct cgaattttgggattaacagcttccattttaaatgggaaatgtgatcctgctgagttagag gagaagatccagaaactggagaaaattttgaagagcaatgctgaaactgcaactgatttg gtggtcttagacagatatacttctcagccatgtgagattgttgtagactgtggaccatat actgacaaaagtgggttgtatggaagattattaatggaattggatgaagcacttgctttt ctaaatgactgcaacatatctgtacattcaaaagaaagagattctaccttaatttctaag cagatattgtcagactgtcgagctgtgttggttgttctgggaccgtggtgtgcagataag gtagctgggatgatggtgagagagctgcagaagtatatcaaacatgaacaagaggagctg cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa gagcacttctcgcctgcctcacttgacctgaaatttgtgaccccaaaagtaataaagctg cttgaaatcttgcgcaaatacaaaccatatgaacggcagcagtttgaaagtgttgaatgg tataacaataggaatcaggataattacgtatcttggagtgattctgaagatgatgatgag gatgaagaaattgaggagaaagagaagccagagactaatttcccatctccctttactaat attttatgtggaattatttttgtggaaagaagatacacagcagttgttctaaataggttg ataaaagaagctggcaagcaagatccagaactggcttacatcagtagcaattttataact ggacatggcattggcaagaaccagcctcgtagcaagcagatggaagtagaatttagaaaa caggaagaggttcttagaaaatttcgagcacatgagaccaacctacttattgctacaagt attgtagaagagggtgttgacataccaaaatgcaacttggtggtgcgttttgatttgccc acagaataccgttcctatgtgcagtcaaaaggaagagctagagcaccaatttccaattac attatgttagcagatacagacaaaatcaaaagttttgaagaagatcttaagacatacaaa gccattgagaagatcctccgaaacaaatgctcaaaatctgttgatgccaatgaaactgaa actgaacccattgttgatgatgatgatgtctttccaccctatgtattgaggccagatgag aacagtccaagggttactattaacactgctattggacacataaataggtactgcgctaga ttaccaagtgatccatttacacacctggctcccaagtgtaagacccgggaactgcctgac catacgttttactctactctctacctgccaatcaactcacctcttcgagcttcaattgtt ggccctccaatgagttgtgcaagactggctgagagagttgttgctcttatttgctgtgaa aaactgcacaaaattggtgaactggatgatcatttgatgccagttggtaaagaaacggtt aaatatgaggaggaacttgatttacacgatgaagaagaaaccagtgttccaggaaggcca ggctctaccaaacgaagacagtgctatcctaaagctattccagagtgtttgagggatagt tatcccaaacctgatcagccctgttacttgtatgtaataggaatggtgttaacgactcct ctacctgatgagctcaacttcaggagaagaaagctgtatcctcccgaggatacaacaaga tgttttggcatattgacagccaaacctatacctcaaattcctcactttcctgtgtatact cgctctggagaggttacaatatccattgagcttaagaaatctggttttactctgtctctg caaatgcttgagctgattacacgactccaccagtacattttttcacatattcttcgtctt gagaaacctgcactagagttcaaacctacagaagctgattcagcctattgtgttctacct ctaaatgttgttgatgactccagcactttggacattgactttaagtttatggaagacatt gagaaatctgaggcacgtacaggcattcccaatacacagtatacaaaagaaatgcctttt attttcaagttagaagattaccaggatgccgttatcattccacgataccgaaattttgat cagcctcatcgattctacgtagctgatgtatacactgatcttactccactcagtaaattc ccttcccctgaatatgaaacttttgctgagtattataaaacaaagtataatcttgacctt actaatcttaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg actcctcgccatttgaatcagaagggaaaagcacttccactgagcagtgctgagaagagg aaagcaaaatgggaaagtttgcagaataaacagatactggttcctgagctctgtgctata catcctattccagcatcattgtggagaaaagcagtttgcctccccagcatactttaccgc ctacactgccttttgacagcagaggaactgagagctcaaacagccactgatgctggtgta ggggttaaatcacttcctgcagatttcagatatcctaacctggactttggatggaaaaag tctattgacagcaagtccttcatctctcttcctaactcctctgtagtagagaatgaaaat tactgtaagcacagcacaattgttgtccctgaaaatgctgcacatcaaggtgctaataga acctcttctgcagaaaaccatgaccaaatgtctgtgagttacagaacattgctcaatgag tcacccagtaaactccaaattgatgtctcggtagaacttgcagcaattaatggtgtttct tataataaaaatcttgccaatggcaattgtgatttagttaacaaagacttttgccaagga aatcagctgaattactgcaggcaggaaatacctgtacaaccaactacctcatatcccatt cagaatttatacaacagtgagaaccagcccaagcccagcaatgaatgtactctaccgagt aataaataccttgatggaaatgctaacagatctacctcagatggatgccccatagtggca gtgaccaccagtacttcaaaagctattaatctttcaaaagacagagcagattctgaaaag agcccttgcagtgggtactcctcaaaaactctcggtcctaatcccggtctcattcttcaa gctttgactctttcaaatgctagtgatggattcaacctggagcggctagagatgcttggt gattcatttttaaagcatgccatcactacatacttgttttgcacttaccctgacgctcat gagggacggctgtcatacatgagaagcaaaaaagtcagcaactgtaacttgtatcgcctt ggaaaaaagaaaggactgccaagtcgcatggtggtgtcgatttttgatcccccagtcaat tggcttcctcctggttacatagtaaatcaggacaagagcaacactgacaaatgggagaaa gatgaaatgacaaaggaaaacatgttggctaatggtaaacttgatgattataatgatgat gaagagaatgaagacctaatgtggaggttgcccaaggaggaaacagactttgaagatgat tttctggagtatgatcaggagcatatcaaattcatcgataatatgttaatgggatcaggg gcttttgtgaagaaaatttcactctcacacttttcaaccactgattcaaactatgaatgg aaagcacccaaaaagtcatccgtgggtaatgttcagtgttcatcagattttgatgatttt gactatagctcttgggatgctatgtgctatctggatcctagcaaggctgttgaagaggat gattttgtagtgggcttctggaatccatcagaggaaaactgcggtgttgatgcaggaaaa cagtccatctcctatgacttgcatacagagcagtgtattgctgacaagagcattgcagac tgtgtggaagccctgttgggctgctatctgaccagctgtggtgaaagagctgctcagctt ttcctgtgttccttggggctgaaggtgctccctgtaattaaaaagactgattgggaaggc actctctgtgctaccgcagagaactgtaacagtgagcagaaaaatcattcaccaaattct gtttctgcttctgtagctaattcagagccttctctgtgtaaagacctggagtatggctgt ttgaagattccaccaaggtgtatgtttgatcacccagatgctgaaaaaaccctaaatcac cttatttctggttttgaaaactttgagaagaaaataaattacagttttaagaacaaggct tatcttcttcaggcatttactcatgcctcttaccattataataccattactgattgttac cagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttat gaagacccacggcaacactctccaggagttcttactgacctacgatctgctctagtcaat aataccatttttgcatcattagctgtaaagtatgactaccacaagtacttcaaagctgtc tctcctgaactgtttcatgttattgatgactttgtgcagtttcaaatggaaaagaatgaa atgcaaggaatggattctgagctcagaagatctgaagaagatgaagaaaaagaggaagac attgaagtaccaaaggccatgggggatatatttgagtcccttgctggtgccatttatatg gatagtggaatgtccttggaaatggtttggcaagtgtactatccaatgatgaggccacta atagaaaaattttctgcaaatgtgccccgttctccagtgcgagagctgctggaaatggag ccagagacagccaaatttagtcctgcggaaagaacttacgatggaaaggtcagagttaca gtggaagttgtaggaaagggaaagtttaaaggtgttggcagaagctacaggattgccaaa tctgcagctgcgagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaac agctga

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