Parus major (Great Tit): 107205652
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Entry
107205652 CDS
T04864
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04136
Autophagy - other
pmaj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107205652 (ATG13)
04136 Autophagy - other
107205652 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107205652 (ATG13)
03029 Mitochondrial biogenesis [BR:
pmaj03029
]
107205652 (ATG13)
Membrane trafficking [BR:
pmaj04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107205652 (ATG13)
Atg1 complex
107205652 (ATG13)
Mitochondrial biogenesis [BR:
pmaj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107205652 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107205652
NCBI-ProteinID:
XP_015485767
Ensembl:
ENSPMJG00000013870
LinkDB
All DBs
Position
5:complement(23362090..23386693)
Genome browser
AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGYPVLFAGGLNAAHPHQLIGPGKEGGVPPVPSQPAHGTQADQERM
CTPLDGVHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPESPETESPLQGSLHSEGSSGSSTGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacagtacaagtaattgtccaggcccgacttggagagaaaatctgtacccgc
tcatcatcctccccaacaggttctgactggttcaatttggcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctgcccgctgttggacggtctatg
tgcgtggagatttctctcaaaacctcagagggggactccatggagctggaaatttggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcatacactgtatacaacagg
ctgtctctactgctgaagtctttgcttgctataaccagagtaactccagcctacagactc
tcaaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtccag
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattataattgatcactttgtggaccgtccctat
cccagctcttcacctatgcatccctgcaattacagagctggtgaggacaatggtgcagtg
tacccctccgtagaggattcccaagaagtgtgtaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatgggactggccttttcacatcaactttccagctctcgt
ctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatcctgtactt
tttgctggtggcttgaatgctgcacaccctcaccagttgattggtccaggcaaagaaggg
ggagttcccccagttcctagccagccagcacatggcactcaagctgatcaagagaggatg
tgcaccccactggatggagtccattactcagcagctactccttctagcagtgaggacaca
gaaacagtatccaacagcagtgaaggaaagtgtggctccccacatgaccttttggagacc
atctttatccggaaggtgggagcttttgtcaacaaacccattaaccaggtgaccatggcc
aacttagacattccttttgccatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgaatccccagaaacggaatctcctctacaaggcagcttacac
tcggagggctccagtggcagcagcacagggaacacccatgatgactttgttatgatcgac
tttaaaccagcattttcaaaagatgacattcttccaatggacctggggacattttaccgt
gaatttcagaacccccctcaactcagcagcctctccattgacattggagcacagtccatg
gcagaggatttggactcgttaccagagaagctggcagtccatgagaaaaatgttaaagaa
tttgatgcttttgtggaaaccttgcagtga
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