Parus major (Great Tit): 107205669
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Entry
107205669 CDS
T04864
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03013
Nucleocytoplasmic transport
pmaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107205669 (PNN)
03015 mRNA surveillance pathway
107205669 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107205669 (PNN)
03041 Spliceosome [BR:
pmaj03041
]
107205669 (PNN)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107205669 (PNN)
Spliceosome [BR:
pmaj03041
]
Complex C
Other components
EJC/TREX
107205669 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
107205669
NCBI-ProteinID:
XP_015485829
Ensembl:
ENSPMJG00000016686
LinkDB
All DBs
Position
5:38523155..38533229
Genome browser
AA seq
694 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALTGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHLFYIPGRMCPATQKLMDESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKIGSGSGHSDAEKEQE
EDEQKHDIEMKVEEPTEVRENDKQQDGQHEEVTVVKEESGNVQPADNEQDVAEMNEADSV
EPVENENGKEIEPETECDVQPEKVCNVTSPKKEKGIKTENKAELEETQEKTPEAQTESVS
EALSQPQSVPLAQSPQLSQSTQDTEPQTEKDENAVVSVKVVEAQAEQNQTPSAEGKTKTR
SRSRGRAGNKTGHNRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSS
RSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaagccaaggaaagcctcaag
cacgtagacgaaaatatccgcaagctcacgggccgggaccccaatgatgtgaggccccct
caaaacaggctgttagccctcacaggccccggtggaggtagagggcgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcaaaaatttaaacaggagtcc
acagttgctattgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaa
gtgcaggcagaggaagagagaaagcaagttgaaaatgagaggcgagaactgtttgaagaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacataacgctaaaataattaaatacataagaacaaagacaaaa
cctcatttattctacatacctggcagaatgtgtcctgctacgcagaagctaatggacgag
tcacagaaaaagatgaatgcactctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccaggcccagaagacaatctgtgaaggaaaaagagcatcaggaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaggaggtaggg
gaggaaaagggaaaaataggttcaggttcagggcacagcgatgcagaaaaagaacaggaa
gaggatgagcagaaacatgacattgagatgaaagtagaagagcctactgaggtgagggag
aatgataagcagcaggatggtcagcatgaggaggtcacagttgtaaaagaggaaagtgga
aatgttcagccagcagataatgagcaggatgtggctgaaatgaatgaggcagatagtgta
gaacctgtagaaaatgaaaatggcaaagaaatagaaccagaaacagagtgtgatgttcag
ccagaaaaagtgtgtaatgttacttctcccaagaaggagaaaggtatcaaaacagaaaat
aaagctgaacttgaagaaacacaggagaaaacacctgaagctcagacagaatctgtgtct
gaggctctgtctcagccacagtctgtgccactagcacaatcacctcagttgtctcagtcc
actcaggatacagagccccagacagagaaggatgaaaatgctgtggtgtctgtaaaggtg
gttgaagcccaggcagagcagaatcagacaccaagtgcagaaggtaagactaagactagg
agtagaagcaggggtagggcagggaacaaaactggtcataaccgtagcagcagcagcagt
agcagtagcacttcaagcagtactaccagtgcaagtagttccagtactggcagcagtacc
agtcgcagcagttccaccagcagcagcactactagtgggagtacaagcagggacagtagc
agcagtagctctagcagtagtgaaagtagaagtcgaagccgaggcagagggcataacaga
gatagaaaacgcagaaggagcacagacaggaagcggagggatgcttcaggagtagacaga
agtcacaagtcctcaaaaggtggtagtagagataccaaaagctcaaaggataaaagttcg
aggtctgacagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttcacgg
agtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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