Parus major (Great Tit): 107205731
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Entry
107205731 CDS
T04864
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107205731 (CTR9)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107205731 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
107205731
NCBI-ProteinID:
XP_015485997
LinkDB
All DBs
Position
5:complement(4171822..4196539)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPPKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHTRNSNSDSEEGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatccctctccgggacaccgacgaggttatcgagcttgac
ttcgatcagttgcctgagggtgatgaagttataagtatactgaaacaggaacacacccag
ctgcacatatggattgccctagcgctggagtactacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagagaccacgagaaa
gatcagatgacatgtctggacactctggcagcctactatgtccagcaggctcggaaggag
aagaacaaagacaacaagaaggagctcatcacccaggccaccctgctgtacactatggct
gacaaaatcatcatgtacgatcagaatcacttattgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcacagttccacttcgtgctcaaccagtctcca
aataatattcctgccctacttggtaaggcatgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagccgaggtt
cggttgggaatgggccactgcttcgtgaaactgaacaagctggaaaaagctcgcttggcc
ttcagcagggctctggagctgaattccaagtgtgttggggccttggttggactggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactcctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtgcaacacttggctcttcatgctttccataacacagaa
gtggaagcgatgcaggcagagagctgttaccagctggcgaggtcttttcacgtgcaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttc
gtacttccattttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctaccctaacaattatgagacaatgaaaatc
cttggatctctttatgcagcttcagaagaccaggagaaacgggatattgcaaaggggcat
ttaaagaaagtcacggaacaatatcctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatatacagggcgctctgtcagcctatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcttgaataatgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcctggcgtcactggatcgt
gcgaaagcagaggctgagcatgatgagcattactacaatgccatctctgtgacaacatcc
tacaaccttgccaggctctacgaggccatgtgtgaatttcatgaagcggaaaagctctat
aaaaacattttgagagaacatccgaattatgttgattgctacttgcgcttgggagctatg
gccagggataaaggcaatttttatgaggcttctgattggtttaaagaagcacttcaaata
aatcaggatcatccagatgcctggtctctgattggaaatcttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acttattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaagaccgcgctttagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgctaatggcataggagctgtcttggcacataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacatatctacgtagagcagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtgttg
ttatatttggcccgggcactgtttaaatgtggcaaattacaggaatgcaaacaaactttg
ttaaaggccaggcatgtggctccaagtgacacagtcctcatgtttaatgtggctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagttctt
aatgctgtgaaagaactggagctcgcccacaggtatttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctctgactta
ctgagccaggcccagtatcacgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgcttaaagaacag
gaagagaagcgtctgagagaaaaagaagagcagaagaaacttctggaacaaagggctcaa
tatgtggagaagaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaagcgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggagtttgatgag
tttgtcaacgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagacctccgaaggcagaagaggggagcgatgatgaagaacacgaaaacggcccgcgg
cctaaaaagcggcgtccacccaaagcagagaagaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacacgagaaacagcaacagcgat
tctgaggaaggggagcagcagcacagcaaacgcattgtttccgacagcgactccgataac
aggaacaagtctggcagcgaggcaggcagtccccgcaggtccagcgcccgcgcatccgag
gaggagtctgacagtgacaggtccccgaggaagaggcggcgctcggagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgaatcg
cgcccagcttcgcgcagcgccgagtccgacagagactccgagagaggctctgaccacgag
ggctctgccagagcttctgggaacgagtctgaaccagaggcatccaatgatgagggctct
gaagggggctcagatgacagcgattag
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integrated database retrieval system
