Parus major (Great Tit): 107205834
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Entry
107205834 CDS
T04864
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107205834 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
ig
Ig_3
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
107205834
NCBI-ProteinID:
XP_015486300
Ensembl:
ENSPMJG00000010037
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Position
5:complement(20057086..20542344)
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AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETINMTTSLTPQSTRSTEKTFTIPVTDTNNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtagtgctgttggctcttcagcttcttgtggtggctggt
ttagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagtg
atctgtgtacggaaaaaccttagagacgtgccagacggcatctccaccaacacccggcta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaagcatctgagg
cacctagaaatcctgcagctcagcaggaatcacatcagaacaattgaaataggggctttc
aatggtctggccaatctcaacactttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctgtcaaaactgaaggaactgtggttgagaaacaaccccatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggttggatctgggg
gagttgaaaaggctttcgtacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagattcctaaccttactccgcttgtaaaa
ctggatgagttagatctttctgggaatcacctgactgccatccggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataaccttcagtcacttgtagagatcaacctggcacacaacaatctaaca
cttctgcctcatgacctgttcacaccactccgcctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tcgaatactgcatgctgtgcacgttgccacacgcctcccagtttaaaaggaaggtacatt
ggtgagctggacctgaattacttcacatgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagagatgaaatgccgggcatcgacctccctg
acctccgtatcttggattactccaaatggatctgtaatgacgcatggggcatacagagtt
cggattgctgtgctcagcgatggcacattaaattttacaaaggtaactgtgcaagacacg
ggtttgtacacatgcatggtgagtaactctgttgggaataccacggcttctgccacgcta
aatgtcaccgccctggataaccctggttacacgtacttttcaaccgtcacggtagagact
gtggaaccttctcaggatgaggcacagaccacagagcaggttgggcccacgccagttacc
aactgggaaaccattaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacattcaccattcctgtgacggacacaaacaacgggatcccaggaatagatgaggtt
atgaagactaccaaaatcataattggttgttttgtggctatcactcttatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacccatagag
agtcatttgcccatgccagcaatagagcatgagcacttaaatcactataactcttataaa
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcgaaagacaatgttcaagagactcaaatctaa
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