Parus major (Great Tit): 107205877
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Entry
107205877 CDS
T04864
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
pmaj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107205877 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107205877 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107205877 (SNW1)
Spliceosome [BR:
pmaj03041
]
Complex B
Other components
Prp19-related factors
107205877 (SNW1)
Complex C
107205877 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
NarE
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
107205877
NCBI-ProteinID:
XP_015486429
Ensembl:
ENSPMJG00000016855
LinkDB
All DBs
Position
5:complement(40465983..40484345)
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AA seq
568 aa
AA seq
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MALTSFLPAPTQLSQDQLELEERARAQRSRQTALVSSRREPPPYGYRKGWIPRVLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAIREVLYALMCLVSSGKLYVLQRDKMYTVVFFLQITEKTRAA
LEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPP
RFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAA
DGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQK
ARERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISE
VIALGVPNPRPSNEIQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQPWRSGKDMAQNIYRP
SKNVDKDMYGDDLEARIKTNRFVPDKEFSNSDRNTRGRGRDGPVQFEEDPFGLDKFLEEA
KQHGGSKRPSDSSRPKEHEHESKKRRKD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttgccagctccaacccagctgtcccaagatcagctagaacta
gaagaaagagcaagagctcagagatccaggcagactgctctggtctcctcacgaagggaa
cctcccccatatggttaccggaaaggatggataccacgggtgctggaggattttggagat
gggggtgctttcccagaaattcatgtggcccaatatccattggatatgggccgaaaaaag
aaaatgtccaatgctttggcagttcaggtggatgcagaaggaaaaataaaatacgatgca
attgctcgacaaggacagtcaaaggacaaggttatttacagcaagtacacagatcttgtg
ccaaaagaggtcatgaatgtggatgatcctgaactgcaaagaccagatgaagaggcaatt
agagaggtattgtatgcactgatgtgcctagttagcagtggtaagctttatgtcttgcaa
cgggataagatgtacactgtggtattttttcttcagataacagagaagacaagagcagcc
ttggagaaatcagtctcccaaaaagttgcagcagccatgcctgttagagctgctgacaaa
ctagctcctgcacagtacattcggtacacaccatctcagcaaggagttgcattcaactct
ggagcaaaacagagagttattcggatggtggaaatgcagaaggatcccatggagcctcca
agattcaaaattaacaagaagattccacgaggaccaccatctcctccagcacctgtaatg
cactctccaagtagaaagatgactgtgaaagagcagcaagagtggaaaattcctccatgc
atttcaaactggaaaaatgcaaagggttacaccattccattagataagcgtctggctgca
gatggcagaggattgcagactgttcatattaatgaaaacttcgccaaacttgctgaggca
ctctatattgctgacagaaaggctcgtgaggcagtagagatgcgtgcccaggtggagagg
aagatggctcagaaggaaaaggagaaacacgaggaaaagctccgagaaatggctcagaaa
gccagggaaagaagagcagggatcaaaacccatgttgaaaaagaggatggagaagctaga
gaaagagatgaaatcagacatgaccggcgcaaagaaagacagcatgacagaaatctctct
cgggcagcccctgataaaaggtcaaagctgcaaagaaatgagaacagagatatcagtgaa
gttattgccctgggggtccccaaccccaggccatccaatgaaatccagtatgaccagagg
ctgttcaaccagagcaagggtatggacagtgggtttgctggaggagaggatgaaatttat
aatgtttatgaccagccttggagaagtggcaaggatatggcccaaaacatctacaggcca
agtaaaaatgtggataaggacatgtatggtgatgatctagaggctcgaataaagactaac
aggtttgttcccgacaaagagttttccaactcggatcgtaacaccagaggcaggggcaga
gatggaccagttcagtttgaagaggatccatttggtttggacaagtttctggaagaagct
aagcaacacggtggttctaaacggccatcagacagcagccgccctaaggaacatgagcat
gagagcaaaaagaggaggaaggactga
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