Parus major (Great Tit): 107206008
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Entry
107206008 CDS
T04864
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1
KO
K05699
actinin alpha 1/4
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04510
Focal adhesion
pmaj04517
IgSF CAM signaling
pmaj04518
Integrin signaling
pmaj04519
Cadherin signaling
pmaj04520
Adherens junction
pmaj04530
Tight junction
pmaj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107206008 (ACTN1)
04518 Integrin signaling
107206008 (ACTN1)
04519 Cadherin signaling
107206008 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107206008 (ACTN1)
04520 Adherens junction
107206008 (ACTN1)
04530 Tight junction
107206008 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
107206008 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107206008 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmaj04812
]
107206008 (ACTN1)
04147 Exosome [BR:
pmaj04147
]
107206008 (ACTN1)
Membrane trafficking [BR:
pmaj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107206008 (ACTN1)
Cytoskeleton proteins [BR:
pmaj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107206008 (ACTN1)
Exosome [BR:
pmaj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107206008 (ACTN1)
Exosomal proteins of colorectal cancer cells
107206008 (ACTN1)
Exosomal proteins of bladder cancer cells
107206008 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
XisI
FAZ1_C
Uds1
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
107206008
NCBI-ProteinID:
XP_033371121
Ensembl:
ENSPMJG00000015055
LinkDB
All DBs
Position
5:28628179..28703496
Genome browser
AA seq
964 aa
AA seq
DB search
MPTTSASEKKFLFFLIGSVFVDQVTLVYYDLDLENDKRFQDFCLSHFRTRKAAQQGLAAA
LSQLSLVTVTQDVGRSGCVAQKVAGTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLE
VISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTI
ILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPEL
IDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSCFYHAFS
GAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQ
QKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGG
LEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEI
KALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALT
QKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTA
HEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEINGKWEHVRQL
VPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNH
LRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINE
VENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDAQKKT
GMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQ
VMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG
ESDL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaacaagtgctagtgaaaagaaatttctgttctttttgataggatcagtcttt
gtggatcaagtcactctagtttactatgatcttgatctagaaaatgacaagaggtttcag
gatttctgcctgagccactttcgtaccagaaaggcagcacagcagggcttagcagctgct
ctgagccaattgtcactggtaactgtgactcaagacgtggggaggagcggctgtgttgcc
cagaaggtggctgggacatttacagcatggtgtaattctcacctccgcaaggctgggaca
cagattgagaacatagaggaagatttcagggatggtcttaaactcatgttacttctggaa
gtcatttcaggtgaacgtctggctaagcctgaaagaggcaaaatgcgagtgcacaaaata
tccaatgtgaacaaggccttggatttcattgccagcaaaggagtcaagctagtatccatt
ggagcagaagaaattgtggatggcaatgttaaaatgacccttggaatgatctggaccatc
atccttcgttttgccattcaggatatctcagttgaagaaacatctgctaaagaaggactt
ctgttatggtgtcagaggaagacagccccttacaaaaatgtcaacatccagaacttccat
atcagttggaaggatggccttggtttctgtgctttaattcatagacaccgtccagagctc
atcgactatgggaagctacgaaaggatgatcctctcactaatctaaacacagcttttgat
gtggctgagaaatacctggatattccgaagatgctggatgcagaagacattgttggaact
gcccgtcctgacgagaaagccatcatgacctacgtgtcctgcttctaccacgccttctca
ggagcccagaaggcggagacagcagcaaatcgtatctgcaaggtgctggcagtcaaccaa
gaaaatgaacagctcatggaagactacgaaaaactggccagtgatctgctggagtggatt
cgtcgcaccatcccctggctggagaaccgggccccagagaacaccatgcaagccatgcag
cagaagctggaggacttccgggactaccgccgcctccacaagccccccaaggtccaagag
aagtgccaactcgagatcaatttcaacaccttgcagaccaagctgcggctcagcaacagg
ccagccttcatgccctccgaagggaaaatggtctcggatataaacaatgcctggggtggt
ctagagcaggctgagaagggctacgaggagtggttattgaatgagatccggaggctagag
aggctggatcacctggcagagaagttccggcagaaggcatccattcatgagtcctggaca
gatggtaaggaagcaatgctgcagcagaaggattacgaaactgcgaccctctcggagata
aaggccctgctgaagaaacacgaggcctttgagagtgacctggctgcgcaccaggaccgc
gtggaacagattgctgctattgcacaagagctcaatgagctggactactatgactcaccc
agtgtcaatgccaggtgccagaagatctgtgatcaatgggataatctgggtgccctaacc
cagaaacgtagagaagccttggagaggacagagaaactactagaaacaattgatcaattg
tacctggagtatgccaaacgagctgcccctttcaataactggatggaaggggccatggag
gatctgcaggacacatttatcgttcacaccattgaggagatccagggattgaccacagct
catgagcagttcaaagccaccttgccagatgccgacaaggagcgacaagccatcctggga
atccacaatgaagtctcaaagattgtccagacatatcatgtcaacatggcaggaacaaat
ccttacactacaatcaccccacatgagatcaatggcaaatgggaacatgtgcggcagctg
gttcccagaagggatcaagctctgatggaagaacacgctcgccagcagcaaaatgaacga
cttcgtaaacagtttggggcacaggccaatgtcattggaccctggatccagaccaagatg
gaggagattggccgcatttcaatagagatgcatgggaccctggaggaccagctaaaccac
ttgaggcagtacgagaaaagcattgtgaattacaaaccaaagattgaccagctggaagga
gaccaccagctgatccaggaagcgcttatctttgacaacaagcacaccaactacaccatg
gagcatatccgcgtgggctgggagcagttactaacaacaatcgctagaaccatcaatgaa
gtggaaaaccagattctgacccgtgatgccaaaggaatcagccaggaacagatgaatgag
ttccgggcttctttcaaccactttgacagggaccactccggcacacttggccctgaggaa
ttcaaagcctgtctcatcagcttgggttacgatattggaaacgatgcacagaagaagact
ggtatgatggattgtgaagatttccgagcctgccttatctccatgggttacaatatggga
gaggcagagtttgcccgcatcatgagcatcgtggacccaaaccgtctgggtgtagtgacc
ttccaggccttcatcgacttcatgtcccgggaaacggcagatacagatactgctgaccag
gttatggcttccttcaagatcctggctggagataagaactacatcactgtggatgaattg
cggcgggagctgcctcctgaccaggctgaatattgcattgctaggatggcaccctacaat
ggccgtgatgctgtacctggtgccctggactacatgtccttctccacagcgctctacggc
gaaagtgacctttaa
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