Parus major (Great Tit): 107206022
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Entry
107206022 CDS
T04864
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107206022 (SCFD1)
Membrane trafficking [BR:
pmaj04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
107206022 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
107206022 (SCFD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
107206022
NCBI-ProteinID:
XP_015486785
Ensembl:
ENSPMJG00000016620
LinkDB
All DBs
Position
5:34936917..34985474
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AA seq
632 aa
AA seq
DB search
MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESAGTENTPAGARPK
KKNKKSYDLTISDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSTQAPSEIDLEQYKKALTDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNATPKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKGKQGKHVLYGCSELFNATQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggatccgggagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctcctgttaaaaacagcacaggagaaccagtatggaaggttctcatttatgacaga
tttggccaagatatcatttcacctttgctgtcagtgaaagagctgagagatatggggatc
actttacatctgcttttgcattcagaccgggatgctattccagatgttccagctgtgtac
tttgtaatgccaacagaagaaaatattgacagaatgtgccaggatcttcgaaaccagctt
tatgaatcttattatttaaactttatttctgccatttcaagaagtaaactggaagatatt
gcaaatgctgccataggtgctaatgcagtaactcaagtggctaaggtatttgatcaatat
cttaattttattactttagaagatgatatgtttgtattgtgtaaccaaaacaaagagctt
gtttcatatcgtgccattaaccgaccagatataacagacacagaaatggaaactataatg
gacactattgttgatagtctcttctgtttttttgttacacttggtgctatacctataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaattggataagaagctcaga
gagaatctgagagatgccagaaacagtctttttacaggtgacactcttggagctggccag
ttcagcttccaaaggcccttattagtccttgttgacagaaacatagatttagcaactcct
ctacatcatacttggacataccaagctttagtgcatgatgttctggatttccatttgaat
agagttaacttggaagaatcagcaggaacagagaatactccagcaggtgctagacctaag
aaaaaaaataagaagtcctatgatttaactatatctgataaattctggcaaaagcataag
ggcagtccttttccagaggtggctgagtctgttcaacaagaactggaatcttacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggcattgaaggggaggatgaagga
gcaataagtatgctttcagataatacagctaagctaacttcagctgtcagctctcttcca
gaacttctggaaaagaagaggctcattgatcttcatacaaatgttgcaacagctgttttg
gagcacataaagagtcgaaagctggatgtgtattttgaatatgaggaaaaaataatgagc
aaatccactctggataaatctctgctggacatgatttctgacccagatgcaggaactcct
gaagacaaaatgcgattatttctcatctattacataagctcaactcaggcaccttcagag
attgacttggagcagtataaaaaagcattgacggatgcaggttgtaatctcgctcctttg
agctacataaaacaatggaaggctttcactaagatggcttcagctccaaccagctatgga
aacgctacacctaaacctttgggtctgttttcacgtgttatgaatacaggatcacagttt
gtaatggaaggagtgaagaacttggtactgaagcaacagaatctgccagtcacacgtatt
ttggacaaccttatggagatgaagtcaaaccctgagacagatgactaccggtattttgac
cccaagatgctacgaggcagtgacagctcagttccaagaaataaaaatccattccaggag
gccatagtgtttgtagttggaggaggcaactatattgaatatcagaatcttattgactac
ataaagggtaaacaaggaaaacatgtcctgtatggctgcagtgaactttttaatgctaca
cagtttataaaacagctgtcccagcttggccagaaataa
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