Parus major (Great Tit): 107206036
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Entry
107206036 CDS
T04864
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
pmaj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107206036
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107206036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107206036
Spliceosome [BR:
pmaj03041
]
Common components
Common spliceosomal components
SR proteins
107206036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
107206036
NCBI-ProteinID:
XP_015486828
Ensembl:
ENSPMJG00000015056
LinkDB
All DBs
Position
5:28711267..28726974
Genome browser
AA seq
284 aa
AA seq
DB search
MACINLKMSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDA
IYELNGKELCDERVTIEHARARRGRGRFSQRFSYYQSQSGSSRYGPPVRTEHRIIVENLS
SRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKL
TEDHRRHRSRSRSRSYSRSRSRSRSTGSSRSDSRSRSRSRSRSRSRSRSRSRSRSRSRSR
SRSRTPKKSYSHKSHRSSLIASSPSPSSSKRKSRSRSSSAHSRS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcatcaaccttaagatgagtggctgccgtgtctttgttggacacttgagctca
cgtgctcgtgaacgggatgtggagaaattcttcaaaggatatggtcgcatacgagaaatc
catctaaaaaatggatttgggtttgtggaatttgaagaccacagggatgctgatgatgca
atttatgaactaaatggtaaagagctgtgtgatgaaagggtcacaattgaacatgctcga
gcccgaagaggaaggggaagattctctcaacggttcagttactaccagtcgcagagtgga
tctagccggtatgggcctcctgttcgtactgaacacaggatcattgttgaaaacctttca
tcccgtatcagctggcaggacctgaaagatgtcatgagaaaggcaggggaggtcacctat
gtggatgcacacagaaacaacaggaatgaaggggttgtggagtttgcatcttacagtgac
atgaagagtgcactggaaaaactggatggaactgagctgaatggacgcagaattaaactg
actgaagaccacagaaggcatagaagcagatcccgatcaaggagttactcaagatctcgc
agcaggtccaggtctacaggatcttccaggtcggacagccggtccaggtcaaggtcccgg
tcccggtccaggtccaggtctcgctctcgatcccgatctcgctctcgatcccgctctcgt
tctcgcagtcgtactcctaaaaagagttactcccacaaaagccaccgctccagcttgata
gcttcttccccctctccctcttcttctaaaagaaaatctcgttctaggtcgagctctgct
catagccgtagttaa
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