Parus major (Great Tit): 107206089
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Entry
107206089 CDS
T04864
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03022
Basal transcription factors
pmaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107206089 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
107206089 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107206089 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107206089 (GTF2H1)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107206089 (GTF2H1)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107206089 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
107206089
NCBI-ProteinID:
XP_015487018
Ensembl:
ENSPMJG00000008670
LinkDB
All DBs
Position
5:13767600..13791355
Genome browser
AA seq
685 aa
AA seq
DB search
MPIGGRPVWPLRTVYPPRRAQDKRQCCHLSIPLTDPCHPSGCCSARSRTWQRLCAAAGQT
GPLAQIFHDSAVACGERKPSSSSKACIDLSELACQPVPTLAKSGLIKTCKRFLYFCSEFD
KTIVGRDWSEMLLIVATMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTV
SHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKF
KRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPHKQDV
GISAAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRF
FQSHYFHRDRLNTGSKDLFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVA
SVASTSNASKSARESSNAAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSD
FFQPPLKKVKLQEAIEYEDLSKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINS
FNSIRQEMEAYVPKLTQVLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKH
LYVAVGELLRHFWSCFPVNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVS
HIEEMLQTAYNKFHTWQSRRMLKKT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgggggaaggccggtctggccgctcaggaccgtgtatcccccccgccgtgcc
caggacaagcggcagtgctgccacctctccatcccgctgacagatccctgccacccctcg
gggtgctgctctgcccgctcccggacctggcagcgtctctgtgccgctgcgggtcagacc
gggccattggcacagatattccatgattctgctgttgcctgcggggagcggaagcctagc
agcagcagcaaggcctgcattgatctgtcagagcttgcctgccagcccgtgcccaccctg
gccaagtcaggattaattaaaacgtgcaaacgtttcctttatttctgctcagaattcgac
aaaaccattgtgggaagagactggagtgaaatgctgctcattgtagccacaatggcaaca
tcatctgaagaagtgttgctgatagtgaagaaggtgcgtcagaagaagcaggatggggcc
ctgtacctgatggctgaacgcattgcgtgggcacctgagggcaaggaccgcttcaccgtc
agccacatgtatgcagacatcaaatgccagaaaatcagtccagaaggtaaagctaaaatt
cagctgcagctggtattgcatgcaggggacacaaccaacttccacttctccaatgaaagc
acagcagtgaaagagcgagatgcggtcaaggatcttcttcaacaactgttgcccaagttc
aaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaagatcctgtt
ttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaagaattctgg
gccaaccgtttaagcctgaatgcaggggataattctgcagcacctcataagcaggatgtg
ggcatctctgcagcattcctggctgatgtacggcctcagacagatggctgcaacgggctg
aggtacaacttgacttcagatattattgaatctatatttcggacataccctgcagtgaaa
atgaaatatgcagaaaatgttccacataacatgaccgagagggaattctggacacggttt
tttcagtctcattattttcatcgggacaggctcaatacaggatcaaaagacctctttgca
gaatgtgccaaactggatgagaaaggcttaaaagcaatggtgtctcaaggagtgaaaaac
cctctaatagatttaacagctttggaagataaaacattagatgaaggctatggtgttgct
tctgtggcctctacatcaaatgcctcaaagtccgctagagaaagtagcaatgctgccatc
ataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcaggaaacaagaa
gcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagggattcagat
ttctttcagccaccactgaaaaaggtaaaactgcaggaggccattgaatacgaagattta
tcaaagaataatagcgttaaaactattgcactaaacttaaagaaatctgataggtattac
catggtccaactccaattcaatcacagcaatatgcaaccagtcaggatataattaattca
tttaatagtattagacaagaaatggaagcatatgtacccaaactaactcaggttctttca
agtggtgatgctgccagcactattgcagtcctgtcacctggaggagcacttatgcagggt
ggaacacagcaagccataaaccagatggtgccaaatgacattcagtctgaactgaaacac
ttgtatgtggcagtaggggaactgctacgacacttctggtcctgcttccctgttaacaca
ccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagatttcaggttaca
aagctctgcccattccaagaaaagattcggagacaatatttaagcacaaatttggtaagt
catatagaagagatgctgcagacagcctacaataagttccacacgtggcagtcccggcgc
atgctgaagaagacgtga
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