Parus major (Great Tit): 107206103
Help
Entry
107206103 CDS
T04864
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107206103 (SAMD4A)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107206103 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
107206103
NCBI-ProteinID:
XP_015487048
Ensembl:
ENSPMJG00000011816
LinkDB
All DBs
Position
5:complement(58675790..58772669)
Genome browser
AA seq
731 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHILEG
EANNPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGGFGGQGRGRSDSLDYGQAHYYHQR
QNSDDKLNGWQNSRDSGISVSASSWQDKNLACENGHLPLYSSSSVPTTINTIGTSTSTIL
SGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVASS
GSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLEGDILEGGNLRVPLQELHQMILTPIKAYSC
QNSSTEEQSRDVDSHHPSLLGSDSQGSECKDSAGAGMQQHHLPGCEGESGGAPLPEGDLP
GQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTELQKKRLLSWKQQVQKLFR
SFPRKSLLELSGYRQQRSRGFGQSNSLPTAGSAGAGLARRNPRQFQIPSRNLPTARLGLL
GPTGLLGTPQRSPAASPAILKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPVHTSPQT
MLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALSGEHSLLLGLFQHVHAASAEPPSTCP
LPPKSWDRLWL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggttggcgtgctggccgggtggttcaagggctggaacgagtgc
gagcagactgttgcgctgctctccctgctcaaacgcgtcagccggacccaggctcgcttc
ctccagctctgcctcgagcattccctggcagactgcaccgagctccacatcctcgaaggg
gaggccaacaaccccggaatcattaaccagtggcaacaggaatccaaggataaagtgatc
tccctcttgttaacccacctgcctttactgaagcccggcaacatcgaggcgaaagtcgag
tacatgaaactcttgcccaaaatcctggcgcactccatcgagcacaaccagcacatcgag
gagagcaggcagctgctgtcctatgccttgatccaccctgccacctccctggaggacagg
agtgccctggccatgtggctcaaccacctggaggaccgcacgtcggggggcttcggcggg
cagggccggggccgctcggactcgctggactacgggcaggctcactactatcaccaaaga
cagaattctgacgacaaactcaacgggtggcagaactctcgggactccggcatcagcgtc
agtgcctccagctggcaggacaaaaacctggcctgtgagaacggccacctgcccctctac
tcctcctcctccgtccccaccaccatcaacaccatcggcactagcacaagcaccattctc
tcaggccagacacaccacagccctttgaaacgctctgtgtcccttaccccacccatgaat
gtgccaaaccaacctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcatcccttccgatcatgcccccctgtctccacaaagcagtgtagcctcttcg
ggaagtggtgggagtgaacatttagaagatcagccttctgctcgtaacacattccaggag
gaagggagtgggatgaaagatgtcccagcctggctgaagagcctccggctgcacaagtac
gccgccctcttctcccagatgacgtacgaggagatgatggccctcaccgaatgccagctc
gaggcacaaaatgttaccaaaggcgcaagacacaaaatagtcatcagtatccaaaagcta
aaagaaagacaaaacctgctcaaatctctagaaggggacatcctggagggcggcaacttg
cgtgtcccactgcaggagctgcaccaaatgatcctcacccccatcaaagcctactcctgc
caaaactcgagcacggaggagcagagccgggacgtggactcgcaccacccctccctgctg
ggctcggacagccaaggctcggagtgcaaggactcggcgggggccgggatgcagcagcat
cacctgccagggtgcgagggcgagtccgggggggcccctttgcccgagggtgacctgcct
ggccagttcacccgagtgatggggaaagtctgcacacaacttttagtttcccgacccgat
gaagagaatataagttcctatttacagctcatagacaaatgtttaatccatgaggcgttt
acagagctccagaagaagcggctgctgtcatggaaacagcaggtgcagaaactctttcgg
tctttccctcggaaatccctcctggagctgtcaggctatcggcagcagaggagccgaggc
tttggccagtccaactccctcccgacagccggatccgcgggggcagggctggcacggagg
aacccccggcagttccagatcccctcccgcaacctccccacggcccggctggggctgctg
ggccccacggggctgctgggcaccccccagcgcagccctgccgccagccccgccatcctc
aagcaaggcagacagaacctgtggtttgccaaccctgggggcagtaacagcatgcccagc
cggagccacagctcggtgcagaggacgcgctcgctgccggtccacacgtccccgcagacc
atgctgatgtttcagcagccagagttccaggtgccggtgactgaacctgacatcaacaac
aggctggagtccctgtgcctgagcatgacggagcacgcactcagcggtgagcattccctc
ctcctggggctcttccagcacgtccacgctgcctccgctgagccccccagcacctgcccc
ctgccccccaaaagctgggacaggctgtggctgtga
DBGET
integrated database retrieval system
