Parus major (Great Tit): 107206316
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Entry
107206316 CDS
T04864
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107206316 (NPAS3)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107206316 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
107206316
NCBI-ProteinID:
XP_015487554
Ensembl:
ENSPMJG00000016650
LinkDB
All DBs
Position
5:35886278..36475767
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AA seq
878 aa
AA seq
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MAPTKPSFQQDPSRRERLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDK
ASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVIGAQRRRSPSALAIEVFESHL
GSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQL
GMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTNPSLLTTDNTLERSFFIRMKST
LTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDC
HMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQ
CVTKYYRWMQKNGGYIWIQSSATIAVNAKNASEKNIIWVNYLLSNPEYKDTPMDIAQLPH
LPEKTSESSETSDSESDSKDNSEDNENSKSDEKGNQSENSEDPESDRKKSGNQSDNEMNC
NEDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGTLGSMQIKVERYVESESDLRLQNCE
SLTSDSAKDSDSAGEVNAQSSSKHQKRKKRRKKQKGGSMTRRRLSSTSSPNGLDSALVDQ
PQLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPS
PQASSSLHVSIPDSVLTPPGTENTASRKTQFSTSSNSALAPVSSDPLSPPLSASPRDKHP
GGPTTSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAE
VTLAMQGNLLPNTHAVNFVDVNSPSFGLDPKTPMEMLYHHVHRLNMSGPFGSAVSGASLT
QMPAGNVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaagccaagctttcagcaggatccttccaggcgagaacgtttacaagct
ttgaggaaggaaaagtcccgagatgctgctcgctctcgccggggaaaggagaattttgaa
ttctatgagttggcaaagttgttgccgctgcctgcagccattaccagccagcttgacaag
gcatccatcatccgacttacaattagctatctgaaaatgagggactttgctaatcaaggt
gatcctccatggaacttgaggatggaaggacctccacctaacacatcagtaaaagttata
ggtgcccagcgcaggagaagtcccagtgcccttgccattgaagtatttgaatcacatttg
ggaagtcatattttacagtccctggatggatttgtatttgcactaaatcaagaaggaaaa
tttttgtacatttcagaaactgtctccatctatttaggcctgtcccaagtggaactgaca
ggcagcagtgtgtttgactacgtccacccaggagaccatgtggagatggcagagcagctg
ggcatgaagcttcccccggggcgaggccttctctcgcagggtacagcagaggatggagcc
agctcagcatcctcatcttcccagtccgagacccctgagccagtggaatctacaaacccc
agtttgctaaccactgacaacactctagagcgctcttttttcatccgaatgaaatctaca
ctgaccaagcgaggagtgcacatcaaatcatcaggatacaaggtgattcatataacaggc
cggttacgtctgagagtatcactgtcacacggacggacagtacccagccaaatcatggga
cttgttgtcgttgctcatgctttgccacctcctacaattaatgaagtcaggattgactgc
cacatgtttgtcactcgtgtgaatatggacctcaatatcatttactgtgaaaataggatt
agtgattacatggatctgacccctgtagatattgtaggaaagagatgttaccacttcatt
catgctgaagatgtggaaggcattagacatagtcacttagacttgctgaataagggtcag
tgtgtaacaaagtattaccgctggatgcagaagaacggaggttatatctggatacaatct
agtgcaaccatagctgtcaacgccaagaacgcaagtgagaagaatatcatttgggtcaat
tacctccttagtaacccagagtacaaggacactccaatggatattgcacaacttcctcat
ctgccagagaaaacctcagaatcctcagagacctctgactctgaatcagactcaaaggac
aactcagaggacaatgagaactcaaagtcagatgagaaaggaaaccagtcagaaaacagt
gaagaccctgaatctgacaggaaaaagtcaggaaatcagtcagataatgaaatgaactgt
aatgaggatgggaacagctccagcaaccaggacagcagggacagtgatgacagctttgaa
aactcagacttcgagaatcaaaaggcccctgaggacagttttggcactcttggctctatg
cagatcaaagtggagcgctacgttgagagtgagtcagacttgcggttgcagaactgtgaa
tcactgacctccgacagtgccaaggactcagacagtgcaggtgaagtaaatgcccagtct
tccagcaaacatcagaagaggaagaagaggagaaaaaagcaaaagggaggcagcatgacc
cggagaaggctgtcaagcacctcaagtccaaatggacttgactcagctttggtggaccag
ccccagctgctctcgtcaccaaacagtgcctcagtgctcaaaattaaaacagaaatctca
gaacctatcaattttgataatgatagcagtatttggaattacccacccaacagggaaatc
tcaaggaatgaatcaccctacagtatgaccaagccccccagctccgagcacttcccttcc
ccccaagccagcagtagtttacatgtctccattccagactctgttctcaccccaccaggg
actgaaaatactgccagccgtaaaactcagttcagcacctcatccaactcggccttggct
ccagtgtcctctgaccctttgtcacccccactttcagcatctccaagggacaaacatcca
ggaggtcccacaacgtccaactctttgttgtacactggggatctggaagcccttcagagg
ttacaagcaggcaatgtggtgcttcctttggttcacagggtaacgggaacccttgctgcg
accagcactgctgctcagagggtctacaccactggcactattcggtatgctccagctgaa
gttactttagccatgcagggcaacctcctccccaacacccatgctgttaactttgttgat
gttaacagccccagctttgggctggatcctaaaacaccgatggaaatgctctaccaccac
gttcaccgactcaatatgtcgggaccgtttggaagtgctgtgagcggggccagtctgacc
caaatgcctgcagggaatgtgttcacaactgccgaaggacttttttccactcttccattt
cctgtgtacagcaatggcattcacactacacagactctggaacggaaagaggattga
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