Parus major (Great Tit): 107206332 Help Entry 107206332         CDS       T04864                                  Symbol DDB1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism pmaj  Parus major (Great Tit) Pathway pmaj03420   Nucleotide excision repair pmaj04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:pmaj00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     107206332 (DDB1)   09124 Replication and repair    03420 Nucleotide excision repair     107206332 (DDB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pmaj04121]     107206332 (DDB1)    03400 DNA repair and recombination proteins [BR:pmaj03400]     107206332 (DDB1) Ubiquitin system [BR:pmaj04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      107206332 (DDB1) DNA repair and recombination proteins [BR:pmaj03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       107206332 (DDB1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       107206332 (DDB1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  107206332 NCBI-ProteinID:  XP_015487596 Ensembl:  ENSPMJG00000006825 LinkDB All DBs Position 5:6947836..6959661 Genome browser AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI IGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICF VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRE TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS QEPKSLVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcctacaactacgtggtgacggcgcagaagccgacggccgtcaatggctgcgtcacc ggacacttcacctctgcggaggacctgaacctgctgattgccaagaacacccggctggag atttacgtggtgacagccgaggggctacggcccgtcaaggaagtgggaatgtatggaaaa accgccgtcatggagctcttccgccccaagggggagagcaaggatttgctgttcatcctg acggccaagtacaatgcctgcatcctggaatacaagcagaacggggatagcattgacatc atcacccgtgcccatggaaatgtgcaggatcgcatcggccgcccctcggagacggggatc atcgggatcattgaccccgagtgccggatgatcgggctgcggctctacgatggcctcttc aaggtcatccccctggatcgggagaacaaggaattaaaggccttcaacatccgcctggaa gagctccaggtcatcgacgtgaaattcctctacggctgccaagctcccaccatctgcttc gtctaccaggatccccagggccgccatgtgaagacatacgaggtgtccctgcgggagaag gaattcaacaaaggcccttggaagcaggaaaatgtggaggccgaagcctccatggtcatc gcagtgccagagccctttggaggtgccattatcatcggacaggaatccatcacctaccac aatggggataaatacctggctatcgctcctcccatcatcaagcaaagcaccatcgtgtgc cacaaccgtgtggatcccaacggatcgcggtatttgctgggagacatggaagggcggctc ttcatgctgctcctggagaaggaagagcagatggatggcactgtcaccttgaaggatctg cgtgtggagctgctgggagagacatccattgctgagtgcctgacctacctggataatgga gtggtgtttgttggctccaggcttggagattcccagctcgtgaagctcaatgtggacagc aatgagcagggatcctacgtggtggccatggagaccttcaccaacctcgggcccattgtg gacatgtgcgtggtggacctggagagacaaggccaaggccagctggtcacctgctccggg gctttcaaagagggatcgttgcggatcatccggaacggcatcgggatccatgagcacgcc agcatcgacctgccgggaattaaaggattgtggccactgaggtcagatccgcaccgggag acggacaataccttggtgctgtccttcgttggccagaccagggttctgatgttgaatgga gaggaagtggaagagacggagctcacaggatttgtggatgaccagcagacgttcttctgt ggcaatgtggcacatcagcaactgatccagatcacctctgcctcggtgcgactggtcagc caggagcccaaatccctggtgagcgagtggaaagagcccaatgggaagaacatcagtgtc gcttcctgcaacagcaatcaggtggtggtggccgtgggaagagccttgtactacctggaa atccggccccaggagctccggcagatcagctgcacagagatggagcacgaggtggcctgc ctggacatcacccccctgggggactccaacgggatgtccccgctctgcgccatcgggctc tggactgacatctctgcccgcatcctgaagctcccgtccttcgagctgctgcacaaggag atgctgggaggagagattatccctcgctccatcctgatgacgaccttcgagagcagccac tacctcctgtgtgccctgggggatggagctctcttctactttggcctcagcctcgagaca ggcttgctgagtgacaggaagaaggtgaccctgggcacgcagcccacagtgctgaggacg ttccgctccttgtccaccaccaacgtgttcgcctgctccgaccgccccaccgtcatctac agcagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc cccctcaattccgacggatatcccgacagtttggccttggccaacaacagcacactgacc atcggcaccattgatgagatccagaagctgcacatccgcactgttcccctctatgagtcg cccaggaaaatctgctaccaagaggtatcccagtgttttggggtgctgtccagccggatt gaggtgcaggatgccagtgggggcaccacggcactcagacccagcgccagcacccaggcc ttgtccagcagcgtgagcaccagcaagctgttttccagcagcacagctccgcacgagaca tccttcggagaggaggtggaagtgcataacctgctcatcatagaccagcacacctttgaa gtgctccatgctcaccagttcctgcaaaacgagtatgccctcagcctggtctcctgcaag ctgggaaaggatcccaacacctacttcattgtgggcactgccatggtgtatcccgaggaa gcggagcccaagcaaggccggatcgttgtcttccactactctgatgggaagctgcagagc ctggctgagaaggaggtcaagggagctgtgtattccatggtggaattcaacgggaagctg ttagccagcatcaacagcacggtccgcctgtacgagtggacagcggagaaggaattgcgc acggaatgcaaccactacaacaacatcatggccctgtacctgaaaaccaagggggatttc atcctggtgggagacctcatgcgctctgtgctgctcctggcctacaaacccatggaaggg aatttcgaggagattgcccgggatttcaatccaaactggatgagtgccgtggagatcctg gatgatgataatttcttgggagcggagaacgctttcaatctgtttgtgtgccagaaggac agcgcggccacgacagatgaggagaggcaacacctgcaggaagtgggattatcccacctc ggagagttcgtcaatgtcttctgccacggatccctggtcatgcagaacttgggagagact tccacacccacccagggatccgtgctcttcggcactgtcaatggcatgatcggcctggtg acatccctgtcggaaagctggtacaacctgctcctggacatgcagaataggctcaacaaa gtcatcaagagtgtggggaagattgagcattccttctggagatcattccacaccgaacgg aagacagaaccggccacgggattcattgatggagacctgatcgagagtttcctggacatc agcaggcccaagatgcaggaagtggtggcaaacctgcagattgacgatggaagcgggatg aagagggaagccaccgtggacgacctcataaagatcgtagaggagctgacccggatccat tag

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