Parus major (Great Tit): 107206498
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Entry
107206498 CDS
T04864
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107206498 (SSRP1)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107206498 (SSRP1)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
107206498 (SSRP1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
107206498 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
SSRP1_C
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107206498
NCBI-ProteinID:
XP_015487864
Ensembl:
ENSPMJG00000006518
LinkDB
All DBs
Position
5:complement(6392998..6399406)
Genome browser
AA seq
705 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYCLELMEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKERKKGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEE
TDESFNPGEEDDDVAEEFDSNASASSSSGDGDSDREDKKPAKKAKIVKDRKPRKKQPESK
KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRK
AEDARRDYEKAMKEYSKADSHRGERSKKKKKKQEKQVKGKGDKKGTTSKSSSSKSPAKGM
SDSFKSKEFVSSDESSSAESKKEDSEDEGAASPPPSSEDSASGSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacgctggagttcaacgagatctaccaggaggtgaaggggtccatgaatgat
gggcggctgcgactgagccggcagggtgtcatcttcaagaacagcaagacagggaaggtg
gacaacatccaggcctcagaactggccgagggcgtgtggcggcgcgtggcgctggggcac
ggcctcaagctgctcaccaagaacggccacgtctacaagtatgatgggttccgggagtcg
gaatttgacaagctctcagatttcttcaaggcccactattgcctggagctcatggagaag
gatctgtgtgtgaagggctggaactggggcacagtgaggtttggagggcagctgctgtcc
ttcgacatcggggagcagccggtgttcgagatcccgctcagcaacgtgtcccagtgcacc
acgggcaagaatgaggtgacgctggagttccaccagaacgatgacgctgaggtctcgctc
atggaggtccggttctacgtgccacccacccaggaggacggtgtggaccccgtggaggcc
ttcgcccagaacgtgctgtccaaggcagatgtgatccaggccaccggtgatgccatctgc
atcttccgggaactgcagtgcctgacgccacgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagaccttcgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctcccgcacaaggaccagcgccagatgttcttcgtgatcagcctggac
cccccgataaagcaaggccagacccgctaccacttcctgatcctgctcttctccaaggat
gaggatatctccctgaccctcaacatgaatgaggaggaggtggagaagcgctttgagggg
cggctcaccaagaacatgtcagggtccctctacgagatggtcagccgggtgatgaaggca
ctggtgaaccgcaagatcaccgtgcctggaaatttccagggacactccggagcccagtgc
atcacctgctcctacaaggccagttcagggctgctgtacccactggagaggggcttcatc
tacgttcacaagccccccgtgcacatccgctttgatgagatctccttcgtcaactttgcc
cgaggcaccaccaccacccgctccttcgactttgagatcgagaccaagcagggcacccag
tacaccttcagcagcatcgagagggaggagtacgggaagctcttcgacttcgtcaatgcc
aagaagctgaacatcaagaaccgggggctgaaggagaggaaaaagggaatgaagcagagc
tatgatgaatatgccgactctgatgaggaccagcacgatgcctacttggagaggatgaaa
gaggagggcaagatccgggaggagaatgccaatgacagcagtgatggctctggagaggag
acagacgagtccttcaaccctggagaagaggatgatgatgtggctgaagagtttgacagc
aatgcctcagccagttcttccagtggtgatggcgacagcgaccgtgaggacaagaagccg
gccaagaaggccaagatcgtcaaggaccgcaagccccgcaagaagcagccggagagcaag
aaggggaaggaccccaacgctcccaagcgccctatgtcggcctacatgctctggctgaac
gccagccgggagaagatcaagtcagaccaccctggcatcagcatcactgatctgtccaag
aaggctggggagctctggaaggccatgtccaaggagaagaaggaggagtgggatcggaag
gcagaagatgccaggcgggactacgagaaggccatgaaggaatacagcaaggctgacagc
cacaggggggagaggtcaaagaagaagaagaagaaacaggagaagcaggtgaaggggaaa
ggggacaagaaaggcaccacctccaagtcctcatcctccaagtccccagctaagggcatg
agcgacagcttcaagagcaaggaatttgtgtccagcgatgagagctcctctgcagagagc
aagaaggaggactcggaggacgagggagctgccagccctccccccagctcagaggactct
gcatccggctcggattag
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