Parus major (Great Tit): 107206549
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Entry
107206549 CDS
T04864
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmaj03009
]
107206549
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107206549
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107206549
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
107206549
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107206549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
107206549
NCBI-ProteinID:
XP_015487926
Ensembl:
ENSPMJG00000014011
LinkDB
All DBs
Position
6:642207..654026
Genome browser
AA seq
700 aa
AA seq
DB search
MAPDGGAALVQRHRALKSARSLSPQAPAPAESLRRGRRRKVKQEETPEKKVKRQVKAKRR
GKTEAEQAQPEESGLGDGEFEPPVPKKTKKVKGKSNGLVGENDASQHVVKSSSAVSVTSP
AAGEQDSDAEELTEEAKEGAFSNFPLSQNTIKLLTARGVKYLFPVQVKTFQPIYDGKDVI
AQARTGTGKTLSFALPLIEKLQSVSQDGRRGRAPKVLVLVPTRELATQVAKDFKNLTKKL
SIACFYGGTPYKEQLDLLKSGIDILVGTPGRIKDHLQNSKLELSNVKHVVLDEVDHMLDM
GFAEQVEEILGSSYKKGSENNPQTLLFSATCPRWVYDVAKKYMRDEYEQIDLIGKKTQRT
ATTVEHLAIQCRSNQRAGVLGDIIQVYSGSRGRTIVFCETKKEANELAMNASLKQDAQSL
HGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGR
TGRAGRTGICICLFQRREEDLLKQVEHKAGITFKRVGVPSATDVIKASSSDAKKLLEAVP
PSAVDYFRKSAEELIDEKGAVAALAAALAHISGAAHIQQRSLLNSTAGFVTMVLKCSIEM
HTMGYAWRGLKEQLGEEVDNKVSAMRFLKGKMGVCFDIPVDELSNIQEQWRDTRRWQLSV
ASELPELEESPQEPGRGFSRFGNSRQGDFKRNSWFKSGNR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgatggtggtgctgcacttgtacaacgccaccgagcgctgaaatcagcgcgg
tctctctcgccccaggcgccggcccccgcagagtcgctgcgccgcggccgccggaggaag
gtcaagcaggaggagacgccggagaagaaggtgaagcgacaggtgaaggcgaagcggcgc
ggtaagaccgaggccgagcaggcgcagcccgaggagagcgggctgggggacggcgaattc
gagccccccgtgcccaagaagacgaagaaagtcaaagggaagagcaacggcttggtggga
gagaacgacgcgtcccaacacgtggtgaaatcttcctccgctgtgagcgtgacatccccg
gctgccggagagcaggacagcgacgctgaggagttgacagaagaagcaaaagaaggcgcc
ttctctaatttccctctctcacaaaacactatcaagcttctcacagctcgaggtgtaaaa
tacctgttccctgtgcaagtgaagactttccagcccatatatgatggcaaagatgtaatt
gctcaagctcgaacaggaactgggaaaaccctttcctttgctcttccactgattgaaaaa
cttcagagtgtctcacaggatgggagaagaggccgtgcaccaaaagtgctggttcttgtt
ccaaccagggaactggccactcaggtagccaaagacttcaagaatctcacaaagaaactg
tcaattgcttgtttttatggaggaactccatataaagaacagcttgatctccttaaaagt
ggcatcgatattcttgtgggaactcctggccggatcaaagaccaccttcagaatagcaag
ctggagctttccaatgtgaagcatgttgttttggatgaagtggatcatatgttagacatg
ggctttgctgaacaagtggaagaaatcttgggatcgtcctataagaaaggctctgagaac
aacccgcagacactgctgttttctgcaacttgtccacgatgggtatacgacgtagcaaaa
aaatacatgagagatgagtatgaacagattgacctgattggaaagaagactcaaaggaca
gccacaactgtggaacacttggctatacagtgtcgctcaaatcagagagcaggagttctt
ggggacatcattcaggtctacagtggcagccgtgggcggaccattgtcttttgtgagacc
aaaaaggaagcaaatgagttggctatgaacgcttcactcaaacaggatgcccagtccttg
catggtgacattccacagaaacagagagaaattacattaaaaggcttcagaaacggtgta
tttgaagtgctgattgcaacaaatgtagctgcccgtggtttggatattcctgaggttgac
cttgttatacagtgctcaccaccaaaagatgttgattcctacatccatcgctctggacgc
acgggtcgagctggccggaccggcatctgcatttgtttgtttcagagaagagaagaagat
cttctgaaacaagtagagcacaaagcgggtattacctttaagcgtgtaggcgttccctct
gctacagatgtaattaaagcttcaagtagtgatgccaaaaagttgctggaggccgttcca
ccctctgcagtagactacttcagaaaatcagctgaagagctgatcgatgagaagggggcg
gtggctgccctggctgcagccctggcacacatttctggggcagctcacatccagcagcgc
tccctgctcaactcaacagctggctttgtgaccatggtgttgaagtgttccatagagatg
cataccatgggctatgcctggcgggggctgaaggaacagcttggggaggaagttgataac
aaagtgtctgcaatgcgtttcctcaaggggaagatgggcgtgtgctttgatatccctgtt
gatgaactgagtaatatacaggagcagtggagggacacgcggcgctggcagctgtcggtg
gcaagtgagttgcccgagctggaagaaagtccccaggaaccaggacgagggttctccagg
ttcggaaacagcaggcaaggagacttcaaaagaaacagctggttcaagagtggaaatcgg
tga
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