Parus major (Great Tit): 107206633
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Entry
107206633 CDS
T04864
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107206633 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmaj04990
]
107206633 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
pmaj04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107206633 (PDLIM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107206633
NCBI-ProteinID:
XP_015488036
Ensembl:
ENSPMJG00000015507
LinkDB
All DBs
Position
6:11806834..11850389
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AA seq
327 aa
AA seq
DB search
MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRTESKVWSPLVSEEGKTHPYKMNLASEPQEIRHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSAVETKTSPGALEPTKPLDQHN
QTPGNIAIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVE
DQIYCEKHARERVIPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgactttgagcagcccctcgccatctcccgggtgactccgggcagcaaagctgcc
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaacacagataac
atgacgcaccttgaggcacaaaacaaaatcaaggggtgcacagatgaactgactctgaca
gtcagcagaacggagtcaaaagtctggtcaccacttgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgagccacaggaaataaggcacataggaagtgcacac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccagcaggcctctactcctcagagaacatccagaccttcaacagtgcg
gtggagacaaaaacatcacctggggccctggagcctaccaagcctttagatcagcataac
cagaccccaggcaacattgctatagacagacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtctgcttcatttcttgtgttgcaagagatc
ttggagtcagaggagaaaggagaccctaccaaaccatctggatttaggagtgtcaaagcc
cctaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgcgacaag
tgtggatctggcattgtagggatgttcgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgtggcaccaatctcaagcagaaaggacacttctttgtggaa
gaccaaatctactgcgagaagcacgcgcgggaacgggtgattcccccggagggctacgag
gtggtcactgtcttcccaaagtaa
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