Parus major (Great Tit): 107206651
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Entry
107206651 CDS
T04864
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04517
IgSF CAM signaling
pmaj04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107206651 (LMO7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107206651 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107206651 (LMO7)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107206651 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107206651
NCBI-ProteinID:
XP_015488071
Ensembl:
ENSPMJG00000013612
LinkDB
All DBs
Position
1:complement(48704132..48835680)
Genome browser
AA seq
1867 aa
AA seq
DB search
MDGKEDSECDFQAAFAEARRWLEAVTGQSFGTKDFRAALENGVLLCDLINKIKPGIIKKI
NCLPTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSNRVTVKPEETNRRVKNVLIT
LYWLGRKAQSDPDYNGPYLNLKAFEKLLGQALTKALEESSQPCRSGRDSGYGDIWYVDRG
EPFSSSASHKRDDSFDSLDSLGSRSCTSFSSDITLKGGSEGCDSDTDSELPSKMHDSHKD
DRSYRRISVIEPKPTTDFNRFLPNKNKQTAYVPAPLRKKRSEKNEDNRRSWASPVFTESD
GTFSSGRDTNPVASCQNSRAECGLTNPASLQITYEYDSGSDSEDERRLPDIVLDDLANRR
FLVKKSPVSSAAPGHRFMLHNDSPKSCSRESYPAGPLAAMLEPLSNQRRQRQLDTKEENK
PRVNNPSQLSGYFDEDEEEVGIPNIEKDDLYFRKLSSSAPNTVVAFDKFLPKFWTPEEEL
LWKKIKKSSFKPWYKEIQGFSRKRSESEDEEFAYKQSCTIVANQPKSSFDWNSSCRRDQN
YKPTAEYLGSSLSQIAEGKILESSDQPSQFSLLQALQKYTDYMSSEMETRIDPTSGPRLI
KCRKNVSFIPGGKQGDEENGYLYPDLENDDLFVRKTGAFHVNQVVLQDPRYLKKFSEQEP
PLEGEIILQPREGQTVIPDLEKDDMIFRKVLSQKKEVPLSGAPDKYHPALFPDPWSLPEE
IRSKFLCLLEKNTTPEERKSNGRVLSPSLHHKKDDMLTRKIESWKVGSNVQPVNFIPGPC
SEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQGSKSLNDVSADELQTMRKIRYEEL
QKIKEQLQEQDLKWQEDLAKWKSRRKSYTSELQKKKEEREEIERRASEVSGRSTKSLKEM
QQEREERDENSYEQQKQEHNWTYSLNDDVFSEEKAPSTAAKDWSAAKDYRLEEDASYSTK
DSRSVYTTQAPKENLSESSAAREAPAPPESLAQEREQSPALLSTRYSVNAQTGSAQVSAS
LPRTYQKTDTSRLTSVVTPRPFGVHSRGISSLPRSFTMDDAQKYNGEVEKAKRTQALFTS
ISFSQPDSAHPLSTGAFRSRGEEEEEEKGVQPTPPPSLALTLKSQDEDAGSSITKSEYGI
PPDSLSLASSAETASPTEPKDSKSMEQYSEMRISINQRPGHSHSFGFTTNWSSSGAIVQT
VEEGSPAALCQLHVDDEIIAVNGTKVSHMDYSQWEEAISRALETGNLVMDVRRYGKNDWG
KDLPSLPYVRHKILNLTSMATNIIGTSENKWIDATSGEKVSNASTTSTKRDFSSSLQSSN
TEAKLINGMQGDLGSNEQRASEPISLKNFKRRSQFFEQGGPEPAMPDLPVPSISAPSRRV
WDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEWLRAKQEAEKESSKYFDEEQTVLTL
NTTSVTSQAPPVSSWRESPEANAPKEPERDGDSELAASLLHEEEGRRRLQEERRIQEEAT
RHFEQEQEPQELELERQRKEREQQYAEEQRQQAEMEEQRRQAERQREVPAEVPQYQRHYE
RYEVSKTIEDRAGHPLVDRHYERYEVSKTIEEQPGQSLADRNKSKSTTELNEFNTIRNGT
QTKYSERSWNTGESQKKSQKEQNLSAAELERQQILQEMRKKTSLHTDSSWIRQRSASIHK
EPVSLYSSSMRRGESLDNLDSSGMRSWRHHSWLNQSASSSSLSSSQDFSRPVSTSNRAYM
CTPSSSKAPPVATSARAPSTSQTAPRAQSPLSASQSGSQTRSRSVSGKKICSYCNNILGK
GAAMIIESLGLCYHLHCFKCVACGCDLGGSRSGAEVRIRNNKLFCNDCYIRFKSTSSGGI
GLLTDLN
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaaagaggacagcgagtgcgacttccaggcggcgttcgccgaagcccggcga
tggctggaggcagttactgggcagagctttggaaccaaagattttcgagcagctctagaa
aatggagtcctgttgtgcgatttgattaacaagatcaaacctggcatcattaagaagatc
aattgtctgccaactccaatagctggcttggataatataaatgtttttctgaaagcgtgc
gaaaacattggactgaaagaagctcagctttttcacccaggagatcttcaggatttgtcc
aatcgagttacagtcaaaccagaggaaaccaacagaagagtgaaaaatgttttgattaca
ttatactggcttgggagaaaagctcaaagtgaccctgattataatggtccatacctcaat
cttaaagcatttgagaagttattagggcaagcattgaccaaggcacttgaagagtccagc
cagccgtgcagaagtgggagagatagtgggtacggtgacatttggtacgttgaccgggga
gagcccttttcatcttcagcctctcataaaagagacgattcctttgatagcttggactct
cttggttcaagatcctgcacgagcttttcatcagatataaccttgaaaggtggcagtgaa
ggttgcgacagtgacacagactcggaactgccttccaaaatgcatgactctcacaaggat
gacaggtcttaccgtaggatttctgtgattgaaccaaaacctaccactgacttcaaccgt
ttcctacccaacaaaaacaagcagacagcatacgtgccagcacctttaaggaagaagagg
tcagagaagaatgaggacaacaggaggagctgggcaagtcctgttttcactgagtcagat
ggaacattttcaagtggacgtgacacgaatcctgtagcttcatgccaaaatagcagagca
gagtgtgggctcacaaatccagcttccctccagatcacctatgagtatgacagtggctct
gattcagaagatgaaagaaggctgcctgacattgttttggatgacttagcaaatcgtaga
tttctagtcaaaaagagccctgtaagctctgctgcacctggacatcgtttcatgttgcac
aatgactctcctaaatcttgctcgcgagaaagttatccagctggtccactagctgcaatg
cttgaaccactgagtaaccagaggaggcagaggcaattggatactaaagaggaaaacaaa
ccaagagttaacaatccttcacaattatctgggtattttgatgaggacgaggaagaagta
ggcatcccaaacattgaaaaagatgatctctattttcgcaagctaagttcttcagcacca
aatacagttgttgcttttgacaaatttcttcctaagttttggactccagaggaagaattg
ctatggaaaaaaatcaagaaatcctctttcaaaccctggtataaagagattcaagggttc
agtagaaagagatcagaatctgaggatgaggaatttgcgtacaaacaaagctgtaccatt
gttgctaatcaaccaaaatcaagttttgactggaacagtagctgcagaagggatcagaat
tataagccaactgctgagtatttgggaagctcattgtcacagattgcagaaggaaaaatc
ttggagtcttctgatcagcccagtcagttttcgttacttcaggccctgcaaaaatacact
gactacatgtcttctgaaatggagaccagaattgatcctacttctggccctaggctcata
aaatgtagaaagaatgtttcctttataccaggaggcaagcaaggagatgaggaaaatgga
tatctatatccagatttggaaaacgatgatttgttcgttcggaaaactggggctttccat
gtgaatcaagttgttcttcaagacccccggtatttaaagaaattctctgagcaggagcct
cctctagagggtgagataattctgcagcccagagagggccaaactgtgattccagatttg
gaaaaggatgacatgatttttcgtaaagtcctctctcaaaaaaaagaggtgcctttatca
ggtgctcccgacaagtatcacccagcactgtttcctgatccatggagtctcccagaagag
attcggtccaaatttctgtgtttacttgaaaaaaacacgacaccagaggaaaggaagagc
aatggcagagtgttgtcaccatctttacaccataagaaggacgatatgctgacccgcaag
attgaatcttggaaagtgggaagcaatgtccagcctgtaaatttcatcccaggtccatgc
agtgaagaagactggaagaagtgggaagcaatcagggaggccagcaaagttagacacaag
aaacggcagatggtggagagactgtttcaaaagctttctgatgagcaagggagtaaatct
ttgaatgatgtcagtgcagacgagctgcagacaatgcgcaaaatccgctatgaagaactg
cagaagataaaagaacagttacaagaacaagatctaaagtggcaagaagatctagcaaaa
tggaagagtcgtagaaagagttacacttcagaattgcaaaagaaaaaggaagagagagaa
gaaattgaaaggagagcctctgaggtgtctggaaggagtaccaaatcactgaaagaaatg
cagcaggagagggaggagagagatgagaactcctatgagcagcagaaacaggagcacaac
tggacatattcactgaacgacgatgtgttcagtgaagaaaaagctccttccacagctgca
aaagattggtcagcagccaaagattaccgtttggaagaagatgcttcctacagcactaag
gacagcagaagtgtgtacaccacacaagcacccaaggagaacctgtcggagagctcggct
gctcgagaagctcctgcgcccccggagagcctggcgcaggaacgggagcagagcccggct
cttttgtccactcgctactcagtgaatgctcaaactgggtcagctcaggtttcagcttct
ctcccgagaacttaccagaaaactgatacctccaggttaacatctgtggttacaccaaga
ccttttggtgtccactcaagaggaatctcgtcacttccacggtcgttcacgatggatgat
gctcagaagtacaatggagaagtagagaaagctaaaagaactcaagctttgttcaccagc
atttccttttcacagccagactctgcacaccctctctccactggtgcattcagaagcaga
ggtgaggaggaagaggaggaaaaaggtgttcagccaacacctcctcctagtttggcatta
actttaaagtcccaagatgaagatgctgggagcagtattactaagtcagaatatggcatt
cctcctgattctctttcacttgcatcttctgcagaaactgcgagtccaacagagcctaag
gattcaaaatccatggaacagtacagtgaaatgagaatcagtataaaccagaggcctggc
cacagtcacagctttgggtttacaacaaactggagttcttcaggagccattgtacagaca
gttgaagaaggcagccctgcagcactttgtcagctgcatgtagatgatgagatcattgct
gtcaatggcacaaaggtttcacatatggactacagtcagtgggaagaggccatcagcaga
gcactagaaactggaaacctggtcatggatgtcagacgatatggaaagaatgattggggc
aaagacctgccttccctgccatatgtaaggcataaaatcctcaatctcaccagtatggct
accaacattataggtacatctgaaaataaatggattgatgcaacttcaggagaaaaagtt
tcaaatgcttccaccacatctacaaaaagagatttctccagcagccttcaaagttctaat
acagaagcaaaattgataaatggaatgcaaggagatcttggctctaatgaacaaagagca
tctgaacctatttctttgaaaaactttaaaagacggtcacaattttttgaacaaggaggc
cctgagcccgcaatgcctgatctcccagtgccatccatcagcgctcctagtcgccgggtt
tgggatcaagaggaagagcgaaaacgacaggaaaaatggcaaaaagagcaggatcgtttg
ttgcaggagaaataccaacgagaacaagagaaactgagggaagaatggctacgagctaag
caagaagcagaaaaagagagctccaagtattttgatgaggagcagactgttctaacccta
aatacaacatctgtcacttctcaggctccacctgtgtccagctggagagaaagccctgaa
gcaaatgcccctaaggagccagaacgagatggggatagcgagctggcagccagcttgctg
catgaggaagaaggaaggaggaggcttcaggaggaacgaaggatccaggaagaagcaacc
cggcattttgagcaagaacaggagccccaggagctggagctcgagagacagcgtaaagaa
agggagcagcaatacgctgaggagcagaggcagcaggcagagatggaggagcagaggcgg
caagcggaaaggcaaagggaggtccccgcggaggtgcctcagtaccagagacattatgag
cgctatgaagtatctaaaacaatagaggaccgagctggccatcctctcgttgacaggcat
tatgagcgttacgaagtttctaaaaccattgaggagcaacctggacagtcacttgctgac
aggaataagtcaaagtcaactacagaactgaatgaattcaacacaatcagaaatggtacc
cagaccaagtattcagaaaggtcctggaacacgggtgagtcacagaagaagtctcagaag
gagcaaaacctgtctgcagcagagttggagagacagcaaatccttcaggaaatgagaaag
aaaacatctctacacacagacagcagctggattaggcagcgcagtgccagcatacataag
gagcctgttagtctgtacagcagtagtatgaggagaggggagtctttggacaatcttgat
tcttcaggaatgaggtcatggaggcaccattcatggctgaaccagtctgcatcctcttca
tctctatcttctagtcaagattttagtcgccccgtgtccacttcaaaccgagcctacatg
tgcactccttcctccagcaaagcacctcccgtggccacctctgcaagagccccctccaca
tcccagacagctccccgggctcagtctcccctctctgcttcccagtccgggtcgcagaca
cgcagcaggtcagtcagtgggaagaaaatctgttcatactgtaataacattctgggcaaa
ggagcagccatgatcattgaatctcttggtctttgttatcatttacattgctttaagtgt
gttgcctgtggatgcgaccttggtggatcccgctctggagctgaagtcaggatccgaaac
aacaaactcttctgcaacgactgctatatcagatttaaaagtacaagttcaggaggaatt
ggtttacttacagatcttaattaa
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integrated database retrieval system
