Parus major (Great Tit): 107206663
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Entry
107206663 CDS
T04864
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107206663 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107206663 (HERC4)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107206663 (HERC4)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
HECT type E3
107206663 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
107206663
NCBI-ProteinID:
XP_015488110
Ensembl:
ENSPMJG00000013961
LinkDB
All DBs
Position
6:complement(286435..315916)
Genome browser
AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECVRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS
PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
SQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWIPYSTQCPMSTDSEE
CYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRNPDLWKQIWTVNETFIQRLLSFPSGRLPV
EIANEIDGTFSSAGCLNGSFLALSSDDHYKTSTRFSGVDMNAARLLFHKLIQPEHTHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAILNLEKAP
LKVLENWWSVLEPPLFLKIVELYKDVVVHLLKLCKMGLPPSDRRVLTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYANWFQQQVLGMDVNHGLTELTEIPVIICTY
PFVFDAQAKTTLLQTDAIIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPKGADIPVVKQNRQDFVDAYV
DYIFNRSVASLYSAFHEGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEDYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggcaatgcatcttttggacagcttggattgggtggaattgatgaagag
attgttttagaacccagaaaaagtgactttttcctaaataaaagggtcagagatgtagga
tgcggactgagacatactgtttttgtcctggatgatgggactgtttatacatgtggatgc
aatgatctaggacaactagggcatgaaaaagccaggaaaagaccagaacatgttggtgca
ctggatgcccaaaatattgtagctgtgtcatgtggagaagcccacactcttgcattaaat
gacaaaggtcaggtatatgcttggggtctggctactgatggacagcttggcttgccagga
acagaggaatgcgtcagagtgcccagaaatattaaaagcttatcagagatccagattgtt
caagttgcttgtggttattatcactcactagcactctcaaaaggaagtgaagtgttttcc
tggggacaaaacaaatacggccagctgggcttaggttatgagtataagaaacaaacctca
ccacaaatgattaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
cacagttttgtactaactctttctggagccatctttggatggggacgtaacaaatttggg
cagctgggtcttaatgatgataatgacaggtatgttcctactctgctgaagtccctgaga
agtcagaaggttgttcatatatgttgtggagaagatcatactgctgcccttacaaaggaa
ggtggggtttttacatttggagctggaggctatgggcagttgggtcataactctaccagc
catgagataaatccaaggaaagtttttgagcttatgggaagcgttgtcacacaaatcacc
tgtggcaggcagcacaccactgcattcgtcccttcctctggaagaatttactcttttgga
ctcggaggcaatggacaattgggtacagggaccaccagtaacaggaaaagtcccttcaca
gtgaaaggaagctggattccctacagtactcagtgcccaatgagcacagacagtgaggag
tgctactgtgttaagagaattttctctggtggtgaccaaagttttgcacactacttttat
ccacagaacatggtaccaccagatgattttaggaatcctgacctttggaagcagatctgg
actgtgaatgaaacatttattcaaagattgctgagtttcccatctggaagacttcctgta
gagatagctaatgaaattgatggaacattctcctcggctgggtgcctgaacgggagcttt
ttggcattgagcagtgatgatcattacaaaaccagcactagattctcaggggttgatatg
aatgctgctagactactctttcacaaactcatacagcctgagcatactcatatatcacaa
caggtggcagctagtttggaaaagaaccttattcccaaattgaccagctccttaccagat
gttgaagctttgaggctgtatctcactctaccagagtgcccgctgatgagcgatgaaaac
aacttcacaacgttagctattccttttggagcagctatcctgaacctagaaaaagctcct
ctcaaagttcttgaaaattggtggtctgtacttgaacctcccttgttcctgaagatagtg
gaactctacaaggatgtcgtagtgcaccttttgaagctgtgtaagatgggccttccacct
tctgacagaagagtgctcaccaatttcctacacacagccttcagagtgctggaaatactg
cacagagtaaatgaaagaggacaagttatacagtatgacagattttacattcatgagata
caagatttgatagatatcagaaatgactatgccaactggttccagcagcaggtgttggga
atggatgtcaaccatggattaactgagttaacagaaattcctgttataatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcttgcaaacagatgcaatcatacag
atgcagatggctgtcgatcaggcccacaggcagaatttgtcttctctcttcctgccagtc
tttgaatctgtcaacccctgcctgatcctcatggtgcggagggacaacatcgtgggcgac
gctgtggaggtgctcaggaaaacaaagaacgtggactacaagaagccactcaaggttatt
tttgtaggggaggaagccgtcgacgcgggaggcgttcgtaaagaattttttttgctcatc
atgagggagttgcttgatcccaaatatggaatgttcaggtactacgaggagtccaggctg
atctggttctctgataagacctttgaagacagtgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcattttcctctggctttgtac
aaaaagctattgaataagaaaccatccctggatgacttaaaagaattgatgccagatgtt
ggcaggggaatgcaacagctactggactatccagaggatgacatagaagaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacggaaattaaggagcttgttcct
aaaggtgctgacattcctgtagtcaaacaaaataggcaagattttgtagatgcatatgtg
gattacatcttcaacagatctgtggcttccttgtacagtgcattccatgaaggcttccac
aaagtgtgtggaggtaaagtgcttcagctcttccagcccagtgagttgcaggcaatggtg
attgggaacacaaattatgactggaaggagctggagaagaatactgaatataaaggagaa
tactgggcagaccatcctacaattaaaatattctgggaggtttttcacgagttgtctttg
gagaagaaaaaacagtttttgctgtttctgacaggcagtgatcggattccaatccttgga
atgaagtgtctgaaactggtcatccagccaacaggaggaggagaggattacctgccagta
gctcacacttgctttaatcttcttgatcttccaaaatacacagataaagaaaccctgaaa
tctaagctgatccaggccatagaccactatgaaggtttcagtttagtataa
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