Parus major (Great Tit): 107206702
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Entry
107206702 CDS
T04864
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X2
KO
K07573
exosome complex component CSL4
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107206702 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107206702 (EXOSC1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107206702 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107206702 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
107206702
NCBI-ProteinID:
XP_015488212
Ensembl:
ENSPMJG00000004134
LinkDB
All DBs
Position
6:20501237..20503668
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AA seq
212 aa
AA seq
DB search
MPRTGPAGSERCGRSGMPRQPLSPCVAGERLCSTEEATAGSGTYTRHGFIFSSLAGCLER
KNEDNELPVVSVVRDSESQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTI
RREDIRATEKDKVEVYKSFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQ
MVPISWCEMQCPRTHTKEFRKVARVQPQFLQT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcactgggccggctgggagcgagcgctgtggccggagcgggatgccccggcag
cccctgagcccctgtgtcgcaggtgagcggctgtgcagcacggaggaggccacggctggg
agcgggacctacactcgtcatggcttcatcttctcctcgctggctggctgcctggagagg
aagaatgaggacaacgagcttcccgtggtgtcggtggtgagagacagcgagtcccagctc
ctgcccaacgtgggggctgtggtgacatgcaaggtctgcagtattaactctcgctttgcc
aaggtgcacatcctgtatgttggctccacgccgctgaagtccaccttccgaggcaccata
cggagagaagatatccgagccacggagaaggataaggtagaagtatataagagcttccgc
cccagtgacatcgtgctggccaaagttatctccctgggggatgcacagtccaactacctg
ctgagcacagcagagaacgagctgggtgtggtggtggcacgcagtgaggcaggggtgcag
atggtgcccatcagctggtgcgagatgcagtgcccacggacacacactaaggagttccgt
aaggtggcccgggtacagccccagttcctgcagacataa
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