Parus major (Great Tit): 107206778
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Entry
107206778 CDS
T04864
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03410
Base excision repair
pmaj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107206778 (POLL)
03450 Non-homologous end-joining
107206778 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107206778 (POLL)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107206778 (POLL)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107206778 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
107206778 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
HHH_5
LIG3_BRCT
NTP_transf_2
PTCB-BRCT
HHH
IMS_HHH
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
107206778
NCBI-ProteinID:
XP_015488449
Ensembl:
ENSPMJG00000004590
LinkDB
All DBs
Position
6:21095228..21116077
Genome browser
AA seq
576 aa
AA seq
DB search
MEPQGIVKAFPKRKKVRDDSGKSIPTKILKEEGTEIPEAEWLKPVIAYVLQAGIGQARAE
IFHRQIVQNGGVVHSQLSSEVTHVIVAEDMDCDRAFRLLRLTKLRPGLQLVKASWLSACI
RDQKLLSTAGYGIFIPHRYLEEEEFQKEQQQILDREKIQPPAEEGAVKLNTESQVEDSSQ
QGLGTLGQQQLAEKYSNDEDSEGEDAGVTQGDLEALISGRYPVKSSEEIKDTVAQPPSKW
VCAQSSNTKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKPVTSYQEA
CKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQGFRT
LDDIRTKATLTSQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACGSYR
RGKATCGDVDVLVTHPDGQSHRGVFCKLLNSLRGSGFLTDDLVSQEDNGDQQKYLGVCRL
PGPAQRHRRLDIIVVPYREFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSAVVRG
PGGAKVSSGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggagccacaagggattgtaaaagcctttcccaagaggaagaaggtgagggatgactca
gggaaaagcatccctacaaagatcctgaaagaggagggaacagaaatacctgaggcagag
tggctgaaaccagtcattgcctacgtgctgcaggctggcattggccaggccagggctgag
atcttccacaggcagattgtccagaatgggggtgttgtacacagccagctctcctcggag
gtgacacacgtcattgtggctgaggacatggactgtgatcgcgcctttcggctcctcaga
ttgaccaagctgcgcccagggctgcagctggtgaaggcatcctggcttagtgcttgcatt
agagaccagaaactgctgagtactgctggctatggcatctttatccctcacaggtaccta
gaggaggaagaattccaaaaagaacagcaacagatcctggacagagaaaaaattcagccc
ccagcagaggagggagcagtgaaactgaatactgaatcacaggtggaggattcctcacag
caaggcttgggcacccttggacagcagcaactggctgagaaatactctaatgatgaagac
agtgaaggagaagatgctggtgtcacccagggagatctggaagcattgatttctggccgc
taccctgtgaaatcatcagaggagatcaaggacacagtggcccagcctcccagcaagtgg
gtttgtgcccagtcttccaacaccaagaaggaaaatcacaaccagtgcatcacagagaag
ctggaagtgctggcaaaggcttactctgtccagggggacaagtggagagctctgggctac
tccaaagcaatcaatgcactcaaaagctaccacaaaccagtcacctcctaccaggaagcc
tgtaaaatccctgggattgggaagcggatggcagagaagatcctggagatcttggagagt
gggcacctgcgcaaactggatcacatcagtgagagtgtccctgtgctggagttattttcc
aacatctggggagcaggggtcaagacagctcagatgtggtaccagcagggtttccggaca
ctggatgacatccgcaccaaggccactctgaccagccagcaggctgtggggctgaagcac
tacacggatttcctggagcgcatgccgcgggaggaagctgcagaaatagagcagacggtc
agacaagctgccctggccctgaagcctggccttgtgtgtgttgcctgtggctcctaccgt
cgggggaaggccacctgtggggatgtggatgtgctggtcacccacccagatgggcagtct
caccgtggggtgttctgcaagctgctcaacagcctccgcgggagtggcttccttacagat
gacctggtgagtcaggaggacaatggtgatcagcagaagtacctgggcgtgtgccgcctg
cccgggccagcgcagcgtcaccgcaggctcgacatcattgtggtgccgtaccgggagttt
gcctgtgccctgctctacttcacaggctcggctcacttcaaccgctccatgcgtgccctg
gccaagaccaagggcatgagcctgtcagagcacgcgctcagctcggccgtggtgcgaggc
cctgggggtgccaaggtgtcctctggccatactctgcccactcccaccgagagagatgtc
ttcattcagctggggctgccttaccgggagccctccgaacgggactggtga
DBGET
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