Parus major (Great Tit): 107206952
Help
Entry
107206952 CDS
T04864
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107206952 (MYOF)
Membrane trafficking [BR:
pmaj04131
]
Endosome - Lysosome transport
Others
Ferlins
107206952 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Motif
Other DBs
NCBI-GeneID:
107206952
NCBI-ProteinID:
XP_015488954
Ensembl:
ENSPMJG00000002933
LinkDB
All DBs
Position
6:15765499..15827978
Genome browser
AA seq
2077 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKIENELNPVWNEIVEFDLKGIALD
NSSSLTIIVKDFETIGQNKLIGSASVALKDLVGNQSRSFPFKLIPLLNERGQEIGATIDL
VVGYEPPAGPANPTDPGGTGAQEDGEDDGGYEDGLDGAVGGITPTIPSGTKEAQLAKRIT
RGKKTRRILSNKPQDFQIRVRIIEGRQLPGNNIKPVVKVHVCGQTHRTRIKRGNNPFFDE
IFFYNVHMTPLELLDETVSIRVYDSHSLRADCLMGEFKIDIGYVYDEPGHAVMRKWLLLS
DPEDTNSGAKGYMKVSMFVLGTGDEPPVEKRERDNESDDVESNLLLPAGIALRWVTFLLK
IYRAEDIPQMDDAFAQTVKEIFGGEADKKNLVDPFVEVSFAGKKVCTNIIEKNANPEWNQ
IIYLQIKFPSMCEKIKLSVVDWDRLTKNDVVGTTYLSLSKIASSGGEIEDFSSSGTGASS
YEVNSGETEVGFLPTFGPCYLNFYGSPREYTGFPDPYDELNFGKGEGVAYRGRILVELST
LSESKPVNKKLEMIPNDDLLVVEKYQRRRKFCLAAVFHSATMLQDTGEPIQFEVSIGNYG
NKFDTTCKPLASTTQYSRAVFDGNYYYYLPWANTKPVVTLTSFWEDISHRLDPVNVILNM
AERLQSNLATLKSGMQAKVSENRLAEMWLKLIDELTEDISKPFPLIEGKSNITVLDTQIE
KLRLKSLKQIGEAAARMRSEATDVKATLTEIEDWLDRLLQLSEEPQNSMPDVIIWMIRGE
KRLAYARVPAHQVLYSTASPESSGKYCGKTQTIFLKYPQDKTKDVKMPAELRINIWLGLS
AVEKKFNSFAEGTFSVFAEMYENQALLFGKWGTSGLVGRHKFSDVTGKIKLKREYFLPPK
GWDWEGEWMVDPERSLLTEADAGHTEFTDEVYENESRYPGGEWKAAEESFTDVNGEKAPP
PREFTCPFGWVWEDDAWKSDLNRAVDEHGWEYGITIPPDTKPKSWVAAEKMYHTHRRRRL
VRKRRRELSEGVTAGRGRSSYEDQEGWEYASLIGWKFHWEQRSSDTFRRRRWRRKMAPSE
THGAAAIFKLEGALGADNSVDDGEGKSSDRTKESATMVFGANTPMVSCYFDRVYTYHLRC
YIYQARNLMALDKDSFSDPYAHVSFLHQSKTTEIIHSTLNPTWDQTLIFNEIEIYGDPQS
IAQNPPNVVIELFDSDQVGKDEFLGRSVCSPMVKLIPEDDITPKLLWYPVTNNGKASGDI
LFAAELILRDKSGTNLPILPSQRAPKLYMVPQGIRPVVQLTAVEILAWGLRNMKNYQLAP
VMSPSLIVECGGEMVESVVIKNLKKTPNFPSSVLFMKVLLPKEELYSPSLVIKVIDHRPF
GRKPIVGQCTIDLLESFRCDPYTTKQDIAPQLKVSLLSAAPRQDTVIDMEDTQPLLTAQC
LSSMSTALSKMASPTTVHLTEKEEEIVDWWSKFYASIGEYEKCGQYIKKGYDTLKVYDCE
LEKVPEFNNLTDFCDTFKLYRGKSEESDDPSVVGEFKGSFKIYALPDDPAIPAPPRQFRE
LPDSGPQECIVRIYIIRALQLQPQDNNGLCDPYIKISLSKKVIEDRDHYVPNTLNPIFGR
MYELSCFLPQEKDLKISVYDYDTLTRDEKVGETIIDLENRFLSRYGSHCGIPQQYWISGV
NTWRDQLKPTQLLQNVARFKGYAPPVLSENGRKINYGGQDYTLEEAEANKILHQHLGPSE
ERLALHILRTQGLVPEHVETRTLYSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNITPRK
AKKYILRVIIWNTKDVLLDEKSITGEEMSDIYVKGWMPGNEENKQKTDVHYRSLDGEGNF
NWRFVFPFDYLPAEQLCLVSKKEHFWSLDKTEFRIPPKLIIQIWDNDKFSLDDYLGFVEL
DLHKTIIPAKVPEKCNIDMIPEYKADSVQKAPRTASLFEQKSMKGWWPCYVEKDGSRILA
GKVEMTLEVVNEKEAEERPAGKGRDEPNMNPKLDLPNRPDTSFLWFTNPCKTMKFIVWRR
FKWLFIGLIILLILFLFVAVLLYSLPNYLSMKIVKPI
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtgattgtggaatctgctaccaatatccctaaaaccaagtttgggaaacca
gatcctatcgtttctgttatttttaaagatgaaaaaaagaaaacaaagaaaattgaaaat
gaactcaatcctgtttggaatgagattgttgaatttgacttgaaaggaattgctctggat
aattcatcttccctaacaattattgtgaaggattttgaaacaattggacaaaacaaatta
attggaagtgcatccgtagcacttaaagatcttgtaggcaaccaaagcagatcttttccc
ttcaaactcatacctctactgaatgaaaggggacaagaaattggagcaacaattgatttg
gtagtaggatatgagccaccagctggacctgcaaatccaactgatccaggagggaccggt
gcacaggaagatggagaagatgatggaggttacgaggatgggttggatggtgcagttggt
ggtatcacaccaacaattccaagtggcacaaaggaagcccagctagctaaacgcatcacc
agaggaaagaaaacacggagaatcctctctaacaaaccacaagattttcagattcgtgtt
agaatcattgaaggtcgtcagttgcctggaaataacataaaaccagtagtcaaagttcat
gtttgtggtcagacacaccggacaagaataaaaagaggaaataacccattttttgatgaa
atatttttctacaatgtccacatgactcctttagagctgcttgatgaaacagttagcatt
cgggtgtatgattctcactctctacgagcagactgtctaatgggtgaatttaagattgac
attggctatgtttatgatgagcctggccatgcagttatgagaaaatggcttttgctgagt
gatcctgaagatacaaattcaggagccaaaggctatatgaaagtcagcatgtttgtcctg
ggaactggggatgagccaccagttgaaaaaagggagagagataatgaaagtgatgatgtg
gagagcaatcttttattacctgctgggattgcacttcgatgggtcactttccttctcaaa
atctacagagctgaggacattccacagatggatgatgcttttgcacaaactgtcaaggaa
atatttggaggagaagcagacaagaaaaacctggtagatccatttgtagaagtttctttt
gctgggaaaaaggtttgcacaaatataattgagaaaaatgctaatccagaatggaatcaa
attatttatcttcaaatcaagtttccctcgatgtgtgagaaaataaaactttcagttgtt
gactgggatcgactgacaaaaaatgatgtagtcggaacaacatatttaagtctttcaaaa
attgcttcttctggaggagagattgaagatttttcatcttcaggaacaggggcttcatca
tatgaagtaaactctggagaaactgaagttggctttttaccaacatttgggccttgttac
ctaaacttctatggaagtccaagagaatacactggattcccagacccatatgatgaatta
aactttggaaagggagaaggagttgcttatagagggaggattctggttgagctgtctaca
ttatctgaaagcaagcctgttaataaaaaattagaaatgattcctaatgatgacttactg
gttgtcgagaagtaccagcgcaggaggaagttctgcttggctgctgtgttccattctgcc
accatgctgcaagacacgggcgagcccatccagttcgaggtgagcatcggcaactacggc
aacaagtttgacaccacctgtaaacctctggcatcaacgacccagtacagccgtgctgtt
tttgatggtaattattattactacttgccatgggcaaacacaaagccagttgtaacgctg
acttctttttgggaggacataagtcatagattagaccctgtgaatgtaatcctaaacatg
gctgaaagactgcaatccaacttagccaccttaaaatcaggaatgcaggctaaagtgtcg
gaaaaccgattagctgagatgtggttgaagctgattgatgaacttacagaagatataagt
aaaccatttcccctcatagaaggcaaatctaatattacagtccttgacactcagatagaa
aaactgcgcctcaagtctctcaaacagattggagaagcagcagcgaggatgagaagtgaa
gctactgacgtgaaagccactctgacagaaattgaggattggttggatagattactgcaa
ctgagtgaggagccacaaaacagtatgcctgatgtaatcatatggatgatccgaggggag
aaaagactggcctatgctcgtgttcctgcacaccaagtgctgtactccacagcaagccct
gaatcatctggtaaatattgtggaaagacccaaacaatcttcttaaagtacccacaggac
aagacgaaagatgtcaaaatgcctgcagaattgcgaattaacatttggctggggctcagt
gctgttgaaaagaagtttaatagctttgctgagggaacattcagtgtttttgcagaaatg
tatgaaaatcaagctctcctttttggaaagtggggtacctcaggacttgttggtcgccac
aagttttctgatgttacaggaaaaatcaaactgaaaagagagtactttctacccccaaag
ggctgggactgggaaggagaatggatggttgatcctgaaagaagtctattgactgaagct
gatgctggtcatactgagtttactgatgaagtgtatgaaaatgagagtcgctatcctgga
ggggaatggaaagcagctgaggagagtttcacagatgtgaatggagaaaaagccccacct
ccacgtgaattcacatgtccttttggatgggtgtgggaagatgatgcttggaaatccgac
ttaaatcgagcagtggatgaacatgggtgggaatatggaattactattcctccagacact
aaacccaagtcatgggttgctgcagagaaaatgtaccacacacatcgacggcgaagactg
gtgcggaaacgtaggagggaactgtctgaaggagtgacagcaggaaggggaaggtcatca
tatgaagatcaagagggatgggaatatgcttccttgattggctggaaattccactgggag
caacgcagttctgatactttccgtcgaagacgatggagacgaaaaatggctccctcagag
acacatggtgctgcagctatctttaaacttgaaggtgctttgggagcagacaatagtgtc
gatgatggagaagggaagagttcagacagaaccaaggagtcagctacaatggtgtttggt
gccaatacaccaatggtttcctgctattttgacagagtatatacttaccaccttcgctgt
tacatctaccaggcaagaaacctcatggctttagacaaagacagtttttcagatccgtat
gctcatgtttctttcctccatcaaagcaaaacaactgagatcattcattcaactctaaat
cctacatgggaccaaactctcatatttaatgaaattgagatctatggggatccacagtca
attgcccaaaatccacctaatgttgttattgaactttttgacagtgaccaagtgggtaaa
gatgaattccttggaagaagtgtttgttcccccatggtcaagttaatcccagaagatgac
atcacaccaaaactgctctggtatcctgtaacaaataatggcaaagctagtggagacatt
ctttttgctgcagagcttattttgagagacaagagtggtaccaaccttccaattcttcca
tcacaaagggcaccaaagctttacatggtccctcaaggaatcagaccagtagttcaactc
actgctgttgagattctggcctgggggttgcgaaacatgaaaaactaccaactggcacct
gttatgtctccaagtctaattgtggaatgtgggggtgaaatggtggaatctgtggtgatc
aaaaacctcaaaaagacaccgaattttccatcttctgttctcttcatgaaagttctttta
ccaaaagaggagttatacagtccatctcttgttatcaaagtaatagaccacagaccattt
ggacggaagcccatcgtgggacaatgtactattgatttactggaaagctttcgctgtgac
ccctacactactaaacaggacattgcaccacaactgaaagttagtctgctctctgctgca
cctcgccaggatacagtaattgatatggaagacacacagcctctgctaacagctcagtgt
ttaagcagtatgtcaacagcactcagcaaaatggcttctccaacaacagtgcatctcaca
gaaaaggaggaagaaattgttgactggtggagcaaattttatgcttcaataggagaatac
gagaaatgtggacagtacattaaaaaaggatatgacactttaaaggtgtatgactgtgaa
ttggaaaaagtacctgaattcaataacttaacagacttctgtgacacatttaaactatac
agagggaaatctgaggagagtgatgatccatcagtggtcggggaattcaagggatcattt
aagatctatgcactgcctgacgatccggctattccagctcctccgcggcagttccgagag
ctgccggacagcgggccccaggagtgcatcgtgagaatctacatcatccgagccctgcag
ctccagccccaggacaacaacgggctgtgtgatccttatataaaaatatctctaagcaaa
aaagtaattgaagacagagatcattatgtgcctaataccctcaacccaatctttggcaga
atgtatgaactcagctgcttcttgcctcaagaaaaggatctgaaaatttcagtctatgat
tatgacacattgactcgtgatgaaaaagtaggtgaaaccataattgatctggaaaacaga
ttcctttctcgttatggatctcactgtggcatcccccagcagtactggatttcaggtgtg
aatacctggcgtgatcaactaaaacccacccagttattgcaaaatgtagccagatttaaa
ggctatgctcctcctgtcctctctgagaatggcagaaagattaactacgggggtcaagac
tatactttggaggaagctgaagctaacaaaatcttgcatcagcatcttggtccgagtgaa
gagcggttagcccttcatatcctcagaacccagggtttggtacccgaacatgtggaaaca
agaaccttatatagcactttccagcccaacatctcccagggaaagctgcagatgtgggtg
gatgttttcccaaaaagcttaggtccaccaggccctccattcaacatcactcctcgaaaa
gccaagaagtatatcttgcgtgtgatcatctggaacaccaaggatgtccttctggatgaa
aagagcatcacaggagaagaaatgagtgacatttatgtgaagggatggatgcctggaaat
gaagaaaataaacagaaaactgatgttcactaccgatcattagatggcgaagggaacttt
aactggagatttgtttttccttttgactatctcccagcagagcaactctgtttagtttcc
aaaaaggaacacttttggagtcttgacaagacagaattcagaatcccacccaaactgatc
attcaaatatgggataatgacaagttctccttggatgactatctgggctttgtggaactt
gatttacataaaacaatcattccagcaaaagttcctgagaagtgtaatatagacatgatt
ccagaatacaaggcagacagtgttcagaaggctcccagaaccgcctctctctttgaacag
aaatccatgaaaggatggtggccgtgttatgttgaaaaggatggctcccgcattttagcg
ggtaaagttgaaatgacattggaagttgtcaatgaaaaagaagctgaggaaaggccagct
ggtaaaggaagagatgagcccaacatgaaccccaaactagatctaccaaaccggccagat
acttccttcctttggtttacaaatccctgcaagaccatgaaatttatcgtgtggcgcagg
tttaaatggctcttcataggccttatcatcttgctgatcctcttcctgtttgtagcagtg
ctcctctattccctgccgaattatttgtctatgaagattgtgaaaccaatataa
DBGET
integrated database retrieval system
