Parus major (Great Tit): 107207100
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Entry
107207100 CDS
T04864
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmaj03009
]
107207100
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107207100
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107207100
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
107207100
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107207100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107207100
NCBI-ProteinID:
XP_015489302
Ensembl:
ENSPMJG00000014010
LinkDB
All DBs
Position
6:630291..641559
Genome browser
AA seq
716 aa
AA seq
DB search
MPEATRCSSSSGAESGSDCSMDTEAVPESGRRRHKKEKKEKKSKRRDKFQRGKTQSDESE
ESDEERYAPKAKKSKSVSKQNGHTKEESLEKSRLSSFSSKSSRRSRQSSSSETSSESESE
SEQDQELTGEQKEGAFSNFSISKETVQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQART
GTGKTFSFAIPLIEKLQGESQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVACF
YGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQ
VEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVE
HLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIP
QKQREITLKGFRNGSFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAG
RTGICICFYQRKEEYQLRHVEQKAGITFKRVGVPTATDIIKASSKDAMRCLDSVPQTAIE
YFRESAQLLIKEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEISNMSY
AWRRLREVLGDDVDRKVNRMCFLKGKMGVCFDVPVADQKEIEARWEDSKHWRLCVATELP
ELVESIRGGGGGGGGGSGGGNGRSFSSSRNGRRGGSGRNRFRARGQKRSFSRAFEH
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggccacccggtgcagcagcagcagcggggccgagtcgggctccgactgctcg
atggacaccgaggcggtcccggagagcggccgccggcggcacaagaaggagaaaaaggag
aagaaatctaaacgtcgggacaagtttcagaggggaaagactcagtcagatgaaagcgag
gaatcggatgaagagcgttatgccccgaaagccaagaaatcaaagagcgtcagtaaacag
aacggtcacacgaaagaggaaagcctggagaaatcgagattgtcctcctttagcagcaaa
tcctcccgcagaagccgacagagtagttccagtgaaacgtcaagtgagagcgaaagcgag
agcgagcaggatcaggagttgactggagaacagaaagagggtgctttctccaatttttcc
atttccaaagaaactgtccagcttcttcaagctcgaggagtgacatacctgttccctgtg
caagtgaagaccttcaacccagtgtattctggcaaagatgtcattgctcaagcacgaact
ggaacagggaaaacattctcttttgctattcccttaattgaaaagcttcagggagagtca
caggaaagaagaagaggccgtccaccaaaggttctagttctttgtccaacgagagagctg
gcaaatcaggttgccaaagatttcaaggacatcacaaggaagctgacagtagcttgtttt
tatggaggaactccctataatggacaaattgacctcatgagaagtggcattgacattttg
gttgggacccctggtcgaatcaaagaccacctgcagaatggcaagctggacctcaccaag
gtgaaacatgttgtacttgatgaagtggaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagttgcatacaagaaggattctgaagacaatccccagacactg
ctgttttctgcaacttgcccacactgggtgtatgatgtggctaagaaatacatgaagtct
agatatgaacagattgaccttattgggaaaagaactcagaaggctgctacaacagtagaa
catttggcaatagagtgtcactggtctcagagagctgcagttattggagatgtcattcag
gtctacagtggcagccacgggaggaccattgtcttctgtgagaccaaaaaggaggcaaat
gagctggctctgaatgcttcaatcaaacaggattgccagtcgttgcatggtgacattcct
cagaagcaaagagagatcacactgaagggttttagaaatggttcatttaaagttctggtt
gcaaccaatgtagctgcccgtggtctagatatcccagaagttgacctggttgtacaaagc
tcaccaccaaaggatgtggagtcctacatccatcgttctgggcgcacaggtcgagctggg
cggactgggatctgcatctgtttttatcagcgaaaggaagagtatcagttaagacacgtg
gaacaaaaagcgggcattacattcaagcgtgttggtgttcctactgcaacagacataata
aaggcttccagcaaagatgccatgaggtgcctggattctgttcctcagactgctattgag
tatttcagagaatctgctcagttgctaataaaagaaaagggaccagttaatgctctggct
gcagccctggcccatatttcaggtgctacttccattgaacagcgctcactgctgaactca
gatgcgggatttgttacaatgattctacgctgctctgaggaaataagcaacatgagctat
gcctggcgaagactgcgagaggtgttgggcgatgacgttgatcggaaggtgaacagaatg
tgtttcctcaaggggaaaatgggtgtgtgctttgacgttcctgtggcagaccaaaaagaa
attgaggcaaggtgggaagattccaaacactggcgtttgtgtgtggcgactgaattacca
gagctggtagaatccatacgaggaggaggaggaggaggagggggagggagtggtggagga
aatggacgaagcttctcaagctccaggaacggtcggcgtggtggctctggtagaaacaga
ttcagggccagaggccagaaacgaagtttcagcagagcgttcgaacattaa
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