Parus major (Great Tit): 107207416
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Entry
107207416 CDS
T04864
Symbol
DYNC1I2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04145
Phagosome
pmaj04814
Motor proteins
pmaj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107207416 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
107207416 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107207416 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107207416 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmaj04812
]
107207416 (DYNC1I2)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
107207416 (DYNC1I2)
Cytoskeleton proteins [BR:
pmaj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
107207416 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
107207416
NCBI-ProteinID:
XP_015489926
Ensembl:
ENSPMJG00000018590
LinkDB
All DBs
Position
7:complement(17651432..17678386)
Genome browser
AA seq
629 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEALPVQEESDLEKKRREAE
ALLQSMGLTPESPVVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHS
DSDLGRGPVKLGMAKITQVDFPPREIVTYTKETQTPVMTQPKEDEEEEDDVVAPKPSVEP
EEEKTLKKEEEEEAAPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSG
RDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEP
DGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQS
KAVAVTCMSFPIGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGINCHAAVG
PVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRL
DLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRGD
EWTRFGRTLAEINANRADAEEEAATRIPA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaggcggagttggagcgcaagaagcaacgattggctcaa
atcagagaggagaagaagagaaaggaggaagaaagaaagaagaaagaaactgaccagaag
aaagaagctcttccagtacaagaagaatctgatcttgaaaagaagagaagagaagctgaa
gcattacttcagagcatggggttgacacctgagtctcctgttgtccctcctcctacctct
ccgtcttccaaatctgtgagtacgccaagcgaggctgggagccaggactccggggatggt
gctgttggatccaggacgctgcattgggatactgatccatcagttcttcagctccactct
gattccgatctgggacgtggacctgttaaacttggaatggccaaaattacacaagttgac
tttcctcctcgagaaattgttacctacacaaaggagacacagacacctgttatgactcag
cccaaggaagatgaggaagaggaagatgatgtggttgcaccaaaaccatcagttgaacct
gaggaagaaaaaacattgaaaaaagaggaggaggaagaagctgcccctcatgagctcaca
gaggaggaaaagcaacaaattttgcattcggaagaatttttaagtttttttgaccactcc
acaaggattgttgaaagagccctttctgagcaaatcaacattttctttgactacagtgga
agagacttagaggacaaagaaggagaaattcaagcgggtgcaaaactgtccttaaatagg
cagttttttgatgaacgttggtcaaagcatcgtgttgtcagttgtctggactggtcatct
cagtatccagaattgcttgtagcctcttacaacaacaatgaggatgcgcctcacgagcct
gatggggtggcccttgtatggaatatgaagtacaagaaaactactccagagtatgtcttt
cactgccagtcggcagtgatgtcagctacatttgcaaaatttcatcccaatctcgtggtt
ggtggcacatactcgggccagatagtgctgtgggataatcgcagcaataagagaacccca
gtgcagagaacaccactttcagctgctgctcacacgcacccagtgtactgtgtaaatgtt
gttgggacccagaatgctcataatttgattagtatctcaactgatgggaaaatatgctct
tggagtctggatatgctttcccaaccacaggatagcatggagctggttcacaaacagtcc
aaggctgtggctgttacctgcatgtctttccctattggagatgtcaacaactttgttgtt
ggcagtgaagaaggctcagtgtacactgcatgccgtcatggcagcaaagctggaatcagt
gagatgtttgaaggacaccagggaccaatcactggtatcaactgccatgcagcagttgga
cctgtagacttctcacatctttttgtcacctcttcttttgactggacagtaaagctttgg
acaacgaagaataacaaacccctctactcctttgaagataattcggattatgtttatgat
gtgatgtggtctccaactcaccctgccttgtttgcctgtgtggatgggatgggcaggctt
gacctgtggaacctcaacaatgatactgaggtgcccactgcaagcattaccgtggagggc
aaccctgctctgaaccgtgtgagatggacacattctgggagagagattgctgtaggtgat
tcagagggacaaatagttatatatgacgtgggagagcaaatcgctgttcctcgcggggac
gagtggacccggtttggccggacgctggcagaaatcaacgccaacagagctgatgcagag
gaggaggctgcaacccgcatcccggcgtaa
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