Parus major (Great Tit): 107207528
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Entry
107207528 CDS
T04864
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107207528 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107207528 (BARD1)
04121 Ubiquitin system [BR:
pmaj04121
]
107207528 (BARD1)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107207528 (BARD1)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107207528 (BARD1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107207528 (BARD1)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107207528 (BARD1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107207528 (BARD1)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107207528 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
NIBRIN_BRCT_II
Ank_KRIT1
ANK_LRRK2
zf-C3HC4_4
zf-RING_UBOX
zf-rbx1
Siva
RTT107_BRCT_5
zf-RING_10
DUF7279
Motif
Other DBs
NCBI-GeneID:
107207528
NCBI-ProteinID:
XP_015490292
Ensembl:
ENSPMJG00000006924
LinkDB
All DBs
Position
7:2700686..2741559
Genome browser
AA seq
788 aa
AA seq
DB search
MREALRGRSGNQPAPGSPLRPAAPSMAQPGHPWSHTRAALGRLEKALSCSRCAGVLREPV
SLGQCEHVFCLSCVGDCVGSECPVCHMPAWVQDAQINQQLDDMIQLCSKLRQLLGTSDSA
EDTSTPTDSDLGKKSKKEQIKMWFSPRSRKIRCIVNRSQAETKSNDLGQGTSSVYDFFPS
PPHETPSKPKKRPTQRQIKKMKKKHLSDINKEWSLEKPEQKRAEKKAPREKCVTICSQPV
VLCTQEPESPEERPQQESVKEAVSSSSTEDGEVLPQVESPEKKDNDEFVRSARDSKEKYC
AAEMLLSIANEATPLKRGREQSGFQGTPQPKRARRSERGVPGKAGRQADGLEESLQGSPI
CPATEQTPGQISSSASKLTPTGMKTRRSAALQAINSPSLSESPSTPPTSKSCSQVPALLS
PAVLKSPGGNTIARRNHKGETLLHVASIKGDLAAVEQLLKNGADPNVKDNAGWTPLHEAC
NHGHSEVVQLLLQHRALVNTTGYQNDSPLHDAARNGHVAIVELLLLHGASRDAVNIFGLR
PVDYAESKKMKSVLMLPVKNESFSLNQPSEALSFSQPRNGPLGILGSSLGAQQQKLLNKL
AAVLKAQRYTEFNSRVTHLIIPDVPMPTTVKCMMAVLTGCWVLKFEWVQACLQSSVREQE
EKYEVQGGPRRGRLNREQLLPKLFDGCYFYFLGPFKQHQKSDLLELVKAGGGQVLVRQPK
PDSDVTQTINTVAYHAEPTSDQRLCTQYVIYDVASKFQPEKIRQGKVWMAPSSWLIDCVM
SFQLLPVK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccgggtagccccctccgc
cccgccgccccctccatggcgcaacccgggcacccctggtcccacacccgcgccgcgctg
ggccggctggagaaggcgctgagctgctcccgctgcgccggcgtcctgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctgtcctgcgtgggtgactgtgttggcagc
gagtgccccgtgtgccacatgccagcctgggtgcaggatgcacagatcaaccagcagctg
gatgacatgatccagctctgcagcaagctgcggcagctcctgggcacctcagattcagca
gaagatacatccacaccgactgactcagacttgggaaaaaagagcaagaaggagcagata
aaaatgtggttcagcccaagaagcaggaagattcgatgcattgtgaacagaagtcaagct
gagactaaaagcaacgaccttggtcaaggcacatcttctgtttacgatttctttccttcc
cctcctcatgaaactccctccaagccaaaaaaaagaccaacccagaggcaaattaagaag
atgaagaagaaacatctatcagacattaacaaggagtggagcttagagaaacctgagcag
aaaagagccgagaagaaggctcccagggaaaagtgtgtgaccatctgcagtcaaccagta
gtgctgtgcactcaggaaccagagagtcctgaagaaagacctcagcaggaatctgtaaag
gaagctgtctccagcagtagtacagaagatggggaagttctaccacaggtagaatcccca
gagaagaaagataacgatgagtttgtgcgctctgcacgagatagcaaggaaaaatattgt
gctgcagagatgttgctgtcaatagcaaatgaagctacgcctttgaaacgtggaagggag
caatccggatttcagggcactcctcagcctaaaagagcaaggagaagtgagaggggtgtt
cctgggaaggcaggcaggcaggccgatggcttagaggagtcactgcagggctcccccatc
tgcccagccactgaacagacaccaggtcagatttcctcctctgcatccaaactcactccc
actggaatgaagacaagaagatctgcagcccttcaagccataaacagcccttcactttca
gaatctccctctactccacccacctctaagtcttgcagccaagtaccagcactgctcagt
cctgctgtgctgaaatcccctggtggcaatacaattgccagaagaaatcacaagggagag
actttgctccatgtggcttccatcaagggtgacttagcagctgtggagcagctgctgaaa
aatggggcagatcccaatgtcaaagataatgctggctggacaccactgcacgaggcgtgt
aaccacgggcacagcgaggtggtgcagctgctgctgcagcaccgggctctggtgaacacc
acgggctaccagaacgactccccgctgcacgacgccgccaggaacggccacgtggccatc
gtggagctgctgctcctgcacggcgcctcccgggatgcagttaatatatttggtctgcga
cctgtggactatgcagaaagcaaaaagatgaaatctgtgctaatgttaccagtgaagaat
gaatcattttcacttaaccagccctctgaggcactgagcttcagccagccaagaaatgga
ccccttggcatactggggagcagtcttggtgcacagcagcagaaattgctgaacaaatta
gcagcagtcctgaaggcccagaggtacactgaatttaacagcagagtaactcaccttatt
atccctgatgttccaatgccaactactgtcaaatgcatgatggctgttctgactggatgt
tgggtcctcaagtttgaatgggtacaagcctgtctgcagagctcagtgcgagaacaagaa
gagaagtacgaagtccaaggtggcccccggcgagggcggctcaaccgagagcagctgctg
cctaagttatttgatggatgctacttctattttttgggacctttcaaacagcaccagaag
agtgatctgctggagctggtgaaagcagggggtggccaggtcctggttaggcagcccaaa
ccagacagtgacgtgacacagaccatcaacactgtggcctaccatgcagagcccacctct
gaccagaggctctgcactcaatatgtcatctatgacgtggcttccaaattccagccagag
aaaattcggcagggcaaggtgtggatggccccctccagctggctcatagactgtgtgatg
tcatttcagcttctgcctgtgaagtga
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