Parus major (Great Tit): 107207689
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Entry
107207689 CDS
T04864
Symbol
NHEJ1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X2
KO
K10980
non-homologous end-joining factor 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107207689 (NHEJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107207689 (NHEJ1)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107207689 (NHEJ1)
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
107207689
NCBI-ProteinID:
XP_015490752
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Position
7:22054658..22098293
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AA seq
330 aa
AA seq
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MPGAVVCPRLRPGAARNPVPLHPPAAYSSCPRMEGSEELESSLLTQPWASVRFDESTFLA
KVCFMDTGYILLISDLSSVWYESADAEAVGQRSKELNKRLTVHVSSFLNHLCNLMCPLLA
GRPSATTSFSCHHSPSGLRLHVKSELSGLPFYWDFHCCPAPLEMVFRHLVRPLIQMNLVL
QCQVQELISLLLQKDAEIEDYRESGAALSRDRLRTKPFQEETFQQNFMAETLPRICGAGE
GQAFASALQQLYTAVTQQEAKKARKRHCSEDSVDTAPIAETTEHPHPPAPSQEDETTSSS
ERTSPASSPSQKPQLPASKAKPKKAKGLFS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagccgtagtctgccctcggctccggcccggcgccgcgcgcaatcccgtgcct
ctgcatcctccggccgcctactcctcctgccctcggatggagggctctgaggagctggaa
agcagcctcctgactcagccctgggcttctgttcgctttgacgagtccacttttcttgcc
aaagtgtgcttcatggacactggctatattctgctcatctctgacctcagcagtgtctgg
tacgagagtgcagatgccgaagctgtgggacaaaggtccaaggagctgaacaagcggctg
acagttcacgtgtcctccttcctgaaccacttgtgcaacctgatgtgccccttgctggca
gggcggccgagtgccaccacctccttctcctgccaccactctcccagtggcctcaggctg
cacgtcaaaagcgagctgtcaggactgccgttctactgggacttccactgctgccctgct
cccttggagatggtgttccgtcacctcgtgcggcccctgattcagatgaacctggtgctg
cagtgccaggtgcaagagctgatttccctgctgctccagaaggatgctgagattgaagat
tacagggagagcggggccgctctcagcagagaccgcctgcggacaaaacccttccaggag
gagacgtttcagcagaacttcatggctgagaccctgccccggatctgcggtgcaggagaa
gggcaggcgtttgcctctgctctgcagcagctctacactgcagtgacacagcaggaggcc
aagaaggctcggaaacggcattgctctgaggacagtgtggatacagcacccattgcagaa
accacagagcacccccatccacctgctccatcccaggaagatgaaacgacatcttccagc
gagagaacctcgccagcctcctccccatctcagaagccccagctgcctgcatccaaggcc
aagccaaagaaggcaaaagggctcttcagctga
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