Parus major (Great Tit): 107207696
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Entry
107207696 CDS
T04864
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03022
Basal transcription factors
pmaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107207696 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
107207696 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107207696 (ERCC3)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107207696 (ERCC3)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107207696 (ERCC3)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107207696 (ERCC3)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107207696 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
107207696
NCBI-ProteinID:
XP_015490773
Ensembl:
ENSPMJG00000019770
LinkDB
All DBs
Position
7:23615818..23635723
Genome browser
AA seq
780 aa
AA seq
DB search
MGRKERDKKKSKKRHYDDDEDDEDEGAGKEPQEAVPSAAGKQVEESGTKVDEYGAKDYRL
QMPLKADHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPD
VIQQLLQDHVIKECRLRNAEGEETELITETFTSKSVISKSSEAGLGPSTSQGTDAQNKPD
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA
ERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAVRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEDEELSFSTKEEQQQLLQKVLQASDLD
AEEEVVAGEYGSKSAQVSRRTGTMSSMSGADDTVYMEYHSSRSKASSNKHIHPLFKRFRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaggagcgggataagaagaagtccaagaagcgccattacgatgacgacgaa
gacgatgaggacgaaggtgccgggaaggagccgcaggaggcggtgccgtcggcggcgggc
aagcaggtggaggagagcggcaccaaggtggacgagtacggcgccaaggactaccggctg
cagatgcccctgaaggctgaccacagctcgcggcccctctgggtggctcctgatggccat
atatttttggaagcattttctccagtttacaaatatgcccaggactttctggttgccatt
gctgagcctgtgtgcagacccacccatattcacgagtacaagctgactgcttactcccta
tatgctgctgtgagtgtgggcttacagacaagtgacatcactgagtatttgcagaaactc
agcaagactggtgtcccagatggaataattcagtttatcaagctgtgcaccgtcagctat
gggaaggtgaagttggttctgaaacataacaggtattttgtggaaagtacccaccctgat
gtcattcagcagcttctgcaagaccacgtaattaaagaatgtcgtctgagaaatgctgaa
ggtgaagagacagagctcattacagagacattcacaagtaaatcagtgatttccaaatcc
agtgaagctggccttggtccatcaacttcacagggaacagatgctcagaataagccagat
gtcccagctgacttatttgagttttatgaacagatggacaaagatgaggaggaggaggag
gaaacgcagacagtgtcttttgaagtcaagcaggagatgattgaagaacttcagaagcgt
tgtatccatttggagtaccccttactggcagaatatgatttcagaaatgattctgtgaat
cctgatatcaatatagatttgaaacctactgcagttctgagaccctatcaagagaaaagc
ctaagaaagatgtttgggaatggacgagccaggtctggagttattgtcttgccatgtggt
gctggcaagtctctggtgggagtgacagctgcatgcactgtgcgcaagcggtgcctggtg
ctcgggaattctgccgtgtctgtggagcagtggaaggcccagttcaagatgtggtccacc
attgatgacagccagatctgtcgcttcacatctgatgccaaagacaagcccattggctgt
tctgttgccatcagcacatactccatgttggggcacacgacaaaaaggtcttgggaagca
gaaagagtaatggagtggcttaaaagtcaagagtggggccttatgatactggatgaagtc
cataccatccctgcaaaaatgttcagacgtgtgctcactattgtacaagctcactgtaaa
ctggggctgactgctaccctggtcagagaagatgataaaattgttgacctgaacttcctg
attggaccaaagctctatgaagccaactggatggagctgcagaacagtggctacattgct
aaagtccagtgtgctgaggtctggtgcccaatgtcacctgaattttacagagaatatgta
gcaattaaaaccaagaaaaggatactgctctacaccatgaacccaaataaattcagagcc
tgtcagtttctgattaagtttcatgagcgacggaatgataaaatcatcgtctttgctgac
aatgtgtttgcactgaaggaatatgcagtcagacttgggaaaccctatatctatggtccc
actgcacaaggggaaagaatgcaaattctacaaaacttcaagcacaatccaaaaatcaac
actattttcatctccaaggtgggggacacatccttcgatctgccagaagccaatgttctc
attcagatctcatcccatggtgggtcacgaaggcaggaggctcaaagactgggacgagtg
ctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattcccttgta
tcccaagacactcaggaaatggcatattcaacaaaacggcaacggtttcttgtagatcaa
ggttatagcttcaaggtaatcacaaagctggcaggcatggaagacgaagaactttcattt
tcaaccaaagaagaacaacagcagcttctccagaaagtcctgcaagcatctgacctggat
gctgaggaggaagtagttgctggagaatatggttcaaagtcagctcaggtgtcccgtcgt
acaggcaccatgagctccatgtctggagcagatgacacggtttacatggaataccactcc
tcacggagcaaagcttcttctaacaaacacatccaccccctgttcaaacgcttccggaag
tga
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