Parus major (Great Tit): 107207886
Help
Entry
107207886 CDS
T04864
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-N
KO
K06252
tenascin
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04510
Focal adhesion
pmaj04512
ECM-receptor interaction
pmaj04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107207886
04518 Integrin signaling
107207886
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107207886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmaj00536
]
107207886
Glycosaminoglycan binding proteins [BR:
pmaj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107207886
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
DUF4998
Il13Ra_Ig
Motif
Other DBs
NCBI-GeneID:
107207886
NCBI-ProteinID:
XP_033372340
LinkDB
All DBs
Position
8:complement(3826348..>3851238)
Genome browser
AA seq
1062 aa
AA seq
DB search
RVSSSSEYLPDEFPGLACLTVGVLLCCALQTSAVHHPASHNCTSSAQRISLSQSCKTDLP
TSSQIKSKANPLQHNENSRVQLDPGEAEEREXQNIIFRHNVDVHPPTRNCEIXPTLRISE
RVEKLXKEVAELKEVFSPQKCCWESQVSCVLFCLIRVSHLQLCIVVLFWPGVPCCSCRGN
AGKCGCDEPFXGEDCSLQVCLENCSSSGICGTAKGVCQCHKEFIGQDWSENQYPRDGSGN
GFCDTGVCYYHNGFFGLSCSKGKTPEILAPQNMQLLNSTENCLSVSWDPVTDMDNYLLTY
YLSWYEMMVKQIHVPKEQLSHEITGARVESHNVKLPSHVKGIASEPKHLEASTVQSAVNV
IWVPEEMEYSLEVEWVNPSTDVHYYKLKFRSLVKMDEKQVMVPKNNDTSSLVSLKPVTEH
EVTVTPVKDSTEGKPSSVTGRTGIPTDLITDQRTEDTATASWNEVEAPLDRYMGRYTSAD
XDTKEIQVGSANDMITLLDLSPDMEYVADICSEKGPQRSKKASTRAVTVMDSTRSLVTGQ
ETEDSATISWDRVQAPVDKYVVSYTCAGGHTKETEVGKDRSITTLPGLKPGVKFTIHLWE
ELGSKQSKKASTDRVDFSFCIEIDPPKNLHVSGVTHSTDVVTWTPPTAQIDGCSLTYQGE
DGTSKEVHLGPSKXLFVLEGLEQGMRYTVFLMAYKGDCLSRRSANSQQVATGIGCCIFPT
CSAAVVHHSRDQRQSLRPMDEQGSSDHNETNWQISGVIPGWVSVLSHTIWRLGNMCSWAL
CECTAGAAAFCTSVLEPLSIEASQGVVPPPALLRDSFSCSVHTVSFLYLYPMDCSQVQQN
RNASSGMYTIYLNRDGSRLLHMYCDMSTDGGRWILSEALLLFLLFDKCNHMDMTQMLVEA
PFSLLNSCFDKLHYLRGCSSFCYELXVDLWTARESVSAVYDFFQVASRLSLGNYRGNVGV
ARTYHNGWKFTMWDRDNDVALSNHALMHQSTWXVKNCHPATLSGKHRERNHREGVNWESW
KGHEFSICFMEMKIHPHSSNDKPVLGRRKKSLSEKRKRSGLK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
agggtcagctcttcctctgagtacctgccagatgaatttccaggactagcttgccttaca
gtgggtgtgttgctgtgctgtgctctccagacatctgctgttcaccatcctgcatctcat
aactgcaccagcagtgctcaaagaatatccttgagccagtcctgtaagactgacctgccc
acatcctcccaaattaaatctaaagcaaatccattacagcataatgagaatagtagggtg
cagctagatcctggagaggctgaggaaagggaanagcagaatataatctttaggcacaac
gtcgatgtgcacccacccacacggaactgtgaaatttgacccacgttaaggatctctgaa
agggtggagaagctttagaaggaagtggcagagctgaaggaagttttcagtcctcagaag
tgctgttgggaaagccaagtttcttgtgttttattttgtctcatccgtgtatcacacttg
cagttgtgcattgtggtgttgttctggccgggtgtgccttgctgcagttgccgtggtaat
gctgggaagtgtggctgtgatgagcctttcnctggtgaggattgcagccttcaggtgtgc
ctggagaactgtagcagcagtgggatctgtggcacagccaaaggggtctgccagtgccac
aaggagttcattggacaggactggagtgagaatcaatatcctagggatggcagtggcaat
gggttctgtgacacaggagtgtgctactatcacaatggcttctttggcctcagctgttcc
aagggaaagacacctgagatccttgctccccagaatatgcagttgctgaactccacagag
aactgtctgtctgtcagctgggatcctgtgactgatatggacaattatctccttacctat
tatctgtcttggtatgaaatgatggtgaaacaaatccatgtgcccaaagagcagctcagc
catgagattactggtgccagggtggaatctcacaatgtcaaacttccatcacatgtgaag
gggattgccagtgagcccaagcatctagaagcaagtacagtccagtctgcagtcaatgtc
atctgggtgccagaggagatggagtactccctggaagtggagtgggtgaacccatcaaca
gatgtgcattactacaagctgaagttcagatccctagtgaagatggatgagaagcaggtc
atggtgcccaaaaacaatgatacatcctcactggtgagcctgaaacctgtaacagaacat
gaggtcactgtcacacctgtgaaagacagcacagaagggaaaccatcctcagtgactggc
aggactggtatcccaaccgacctgataaccgaccaaaggacagaagataccgccactgcc
tcatggaatgaagtggaggctcccttagacaggtacatggggagatacacctcagctgat
tgagacaccaaggaaatacaggtgggcagtgcaaatgacatgatcaccttactggatctg
agtcctgacatggaatatgttgctgacatctgctcagagaaggggccccagaggagcaag
aaggcaagcaccagagctgtgacagtaatggacagcacaagaagtctggtaactggccaa
gagacagaggactcagccaccatctcctgggacagagtccaagctcctgtggacaagtat
gtggtgagctacacttgtgctggtgggcacactaaagaaacagaagtggggaaggacagg
agcattaccacccttccaggactgaagccaggagtgaaattcactatccatctctgggaa
gagctggggagcaagcagagtaagaaggcaagcactgacagagttgacttttctttttgc
atagagattgatcctcccaagaacctccatgtgtcaggtgtgactcattctactgatgta
gttacctggactcctcccacagcacagattgatggctgttctctgacctaccagggtgaa
gatggtacaagcaaagaagtacatctgggtcccagcaaataattgtttgtgctagaaggg
ctggaacaaggaatgaggtacactgtctttttgatggcctacaagggagattgcctgagc
agaaggagtgcaaattctcaacaggtagcaactggcattggatgttgcatttttcccacg
tgctctgcagctgttgtgcatcacagcagagatcaaagacagagtttgcgtcctatggat
gaacagggaagcagtgatcataatgaaaccaactggcaaatcagtggcgttattcctggc
tgggtgtctgttctcagccacaccatctggaggcttgggaacatgtgcagctgggccctg
tgtgagtgcacagcaggagctgctgctttctgtacttctgttctagaacccttgtccata
gaagcttcccaaggggtagtgcctcctcctgctttgctgagggacagtttttcctgctct
gttcacacagtcagcttcctctacctgtatcctatggactgcagccaggtacagcagaat
agaaatgcctccagtggcatgtacaccatttacctgaacagggatggcagcaggctgctg
cacatgtactgtgacatgagcactgatggaggcaggtggatactgagtgaggctctgctc
ctcttcctgctttttgataaatgtaatcacatggacatgacacaaatgttggttgaggct
cctttctctctgctgaactcctgttttgacaagctgcactacctcaggggctgcagctct
ttctgctatgagctcnntgtggatttgtggacagccagggaatctgtctctgctgtctat
gatttcttccaggttgcctcaaggctgtcactagggaattacagaggcaatgttggggtt
gcaaggacctaccacaatggctggaagttcacaatgtgggacagggacaatgatgtggct
ctcagcaaccatgccctgatgcaccagagcacgtggngggtaaagaactgccacccagcc
accctcagtgggaagcacagggagagaaatcacagggagggtgtgaactgggagtcatgg
aaaggacatgaattctccatctgttttatggagatgaagattcatcctcattcttccaat
gataagccagtcctggggaggaggaagaagtctttatcagagaagaggaaaagatcaggg
cttaaatag
DBGET
integrated database retrieval system
