Parus major (Great Tit): 107207916
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Entry
107207916 CDS
T04864
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04510
Focal adhesion
pmaj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107207916 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107207916 (LAMC1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
107207916
NCBI-ProteinID:
XP_015491141
Ensembl:
ENSPMJG00000019219
LinkDB
All DBs
Position
8:complement(6911984..6987731)
Genome browser
AA seq
1600 aa
AA seq
DB search
MGDGGERWALWLWVLWLWVPARCGGAMDECAEERSGRAQRCMPEFVNAAFNATVLATHTC
GAPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAVFLTDYNSPADATWWQSRTMLAGVQH
PTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTQEDGPWVPYQYYSGSCESTYHKI
NRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDI
RVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCKH
NTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRATGHGGHCTA
CAGNTDGPHCERCRDSFYRLASDEACLPCSCNPVGSLSTQCDSYGQCSCKPGVMGDKCDR
CQPGFHSLSEAGCRPCSCNAAGSTGECNIETGRCACKDSVEGFHCERCKPGFFHLDSSNP
RGCTPCFCFGHSSVCTSAVGYSIYNITSSFESGEDEWRAEQRDGSEVLLQWSAETQDISV
ISDTYFPMYFVAPRKFLGNQVLSYGQNLTFSFHVDRRDTRLSAEDLVLEGAGLRVSVPLI
AQGNSYPSENVQTFTFRLHEAADYPWRPALMAFEFQKLLYNLTSIKIRGTYSERSAGHLD
DVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCTSGYRRETPSLGPYSPCVPCTCNGH
SETCDSETGMCNCRDNTAGTHCEKCSDGYYGDATAGTASDCQPCPCPGISSCAIVPRTKE
VVCTSCQAGTTGKRCELCDDAYFGDPLGKKGAVRPCRLCQCNNNIDPNAVGNCDRQTGEC
LKCIYNTAGFYCDRCKDGFFGNPLAPDPSDKCRACHCNPYGTVNQQTNCNQVTGQCECLS
HVTGRDCSACEPGFFNLQSGRGCERCNCHVLGSTSGQCDIQTGQCECQPGVTGQHCDRCE
ANHFGFGSEGCKPCDCDPEGSESLQCRENGHCECKEGFVGSRCNQCEENYFYNRSWPGCQ
ECPACYRLVKDKVAEQRQRLQELENLIANLGTREETVTDEAFEERLKQAEREVTELLHEA
QKSKDVDQGLMDRLRDINSSLVSQLNRLRNIQGTVQDTENLAEQARVRVEDTEDLISLAS
DMLEKAKMAAVNVSITSPEQIGDPNNMTLLAEEARKLAERHKKEADEIVRTAKAANDTST
EAYQLLMKTLAGENQTAIDIDELNQKYSQARNISQDLEKQANKVLVEAEEAGNRALEIYA
NLTSLPTVDSTGLENEANKINKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKGK
TEQQTADQLLARADAAKALAEEAARKSSGTLQEANTILSNLKDFDRRVNDNKTAAEEALK
KIPTISQTIAEANNKTHQAELALGNAAADAREAKARADDAEKIASSVQESAAATRAEADK
TFAHVTGLAREVDDVMKQLQDAEKELKQKQANAEQDMKMAGEASQAAQEAEDNARKAKNS
VNSLLTVINDLLDQLGQLETVDLNKLNEIEGTLSSAKNQMKDSDLDQKVSFLEREAKKQD
DAIQAYNRDIEDILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggcggtgaacgctgggcgctgtggctgtgggtactatggctgtgggtgccc
gcgcggtgtggcggtgccatggacgagtgcgcggaggagcggagcgggcgggcgcagcgc
tgcatgccggagtttgtgaacgcggcgttcaacgctacggtgctggccacgcacacgtgc
ggggcgccggccgaggagtactgcgtgcagaccggggtcaccggcgtcacccagtcctgc
cacctctgcgacgccgcccagccgcacctgagccatggcgccgtgttcctcaccgactac
aacagtccggccgacgcgacctggtggcagagccgcaccatgctggccggcgtgcagcac
cccaccgctgtcaacctcaccctgcacctgggaaaagcgtttgacatcacgtatgtgcgc
ctgaagttccacaccagccggcctgagagttttgccatctacaagcgcacgcaggaggat
ggcccttgggtgccctaccagtactacagtggatcctgtgagagcacctaccacaaaatc
aaccgtggctttatccgcactggggaggacgagcagcaggcactctgcactgatgagttc
agtgacatctcccctcttactggaggcaatgtggccttctcaacactggaggggcgtccc
agtgcctacaactttgacaacagcccagtgctgcaggaatgggtgacagctacagatatt
agagtgaccctcaatcgtctgaacacatttggagatgaagttttcaatgacccaaaagtt
ctgaagtcttactactatgcaatttctgattttgctgtgggtggtagatgcaaatgcaat
gggcacgcaagtgagtgtgtgaagaatgagcttgggaagctggtctgcaactgcaagcac
aacaccttcggagtggactgtgagaagtgccttcctttcttcaacgaccgcccatggagg
agggcaaccgcagagagcgccaacgagtgcctgccatgcgactgcaacgggcggtcccag
gagtgctactttgaccccgagttgtaccgtgccacgggccatggcggccactgcaccgcc
tgtgccggcaacacagatggaccccactgcgagcgctgccgggacagcttctaccgcctg
gccagtgatgaggcctgtctgccatgcagctgcaatccagtcggctccctcagcacacag
tgcgacagctacggccagtgcagctgcaaacctggtgtgatgggggacaagtgtgacagg
tgccagccagggttccactccctctctgaagctgggtgcaggccatgttcttgcaatgct
gctggtagcacaggggaatgtaacattgagacagggcgatgtgcgtgcaaggacagtgtg
gaaggattccactgtgagagatgcaaacctggatttttccatctggattcctccaaccca
agaggctgtaccccttgcttctgttttggacactcttcagtctgcaccagtgctgtgggc
tacagtatctataacatcacatccagcttcgagtctggagaggatgagtggcgtgctgag
cagcgtgatggctcggaagtcttgctccaatggagtgctgagacccaagatatctccgtt
atctcagacacctactttcccatgtacttcgttgcaccccgcaagttcttgggcaaccag
gttttgagttacgggcaaaacctgactttctccttccatgtggacaggcgggacacacgc
ctctctgcagaagacctggtgctggaaggggctgggctgagggtgtcagtgcctctcatt
gcccagggcaactcctaccccagtgagaatgtgcagaccttcaccttcaggctccatgag
gctgcagattacccgtggaggcctgctcttatggcatttgaattccaaaagcttctctac
aacttgacttccatcaagatccgtgggacatacagcgagagaagtgccggtcacctggat
gatgtcaccatcacaagtgctcgtcccggacccggtgtgcctgtggcctgggtggagagc
tgctcatgtccagtgggatatgaggggcagttctgtgagcgttgcacctctgggtaccgg
cgagagaccccaagcctcgggccctacagcccctgtgtgccttgcacatgcaacgggcac
agcgagacatgtgattctgagacgggcatgtgcaattgcagggataacacagcggggact
cactgtgagaagtgcagcgatgggtattatggcgatgccacggctggcacagcctcggat
tgccagccctgcccgtgcccaggcatctcaagctgtgccattgtgccccgcaccaaagag
gttgtgtgcaccagctgtcaggctggcactacaggcaagaggtgtgagctgtgtgatgat
gcctatttcggagacccactgggcaaaaaaggtgccgtgaggccctgccgcttatgccag
tgcaacaacaacatcgaccccaatgctgtgggcaactgtgaccgccagaccggcgagtgc
ctcaagtgcatctacaacactgctggcttttactgcgaccgctgcaaggatggcttcttc
gggaaccccctggcccctgacccctctgacaagtgcagagcttgtcactgcaatccctac
ggcacagtgaatcagcagacgaattgcaatcaagtgactgggcagtgtgagtgcttgtct
catgtcactgggagggactgcagtgcctgtgagcctggattcttcaacctccagagcgga
cgtggctgtgagaggtgcaactgccacgtgctgggctccaccagtgggcagtgtgacatc
caaacaggacagtgcgagtgccagccaggcgtcaccggccagcattgtgacagatgtgag
gcaaaccactttggctttggctctgaaggctgtaaaccatgtgactgtgatcctgagggc
tcggagtccctgcagtgccgggagaacggtcactgtgagtgcaaggaaggcttcgtgggg
agccgctgcaaccagtgtgaggagaactatttctacaaccgctcgtggccaggctgccag
gagtgtccagcctgttacagattagtgaaagataaggtagcagagcagcgtcaaagactg
caggagttggaaaatcttatagcaaatctgggtaccagagaagaaactgtaactgatgaa
gcctttgaagagaggttgaagcaggcagaaagagaagttacagagttgctccatgaagca
caaaagagcaaagacgtagatcagggcctcatggatcgtctcagagacatcaacagcagc
ttagtgagtcaactcaacaggctgaggaacatccagggcacggtgcaggacacagagaac
ctggcggagcaggcacgggtgcgggtggaggacactgaggacctgatcagcttggcttct
gatatgctggagaaggccaagatggcagctgtcaacgtgtccattacatctccagagcaa
attggggaccccaacaacatgactctgttggcagaagaggcccgtaagctggcagaaagg
cacaagaaggaagctgatgagattgttcgcacagccaaggctgcaaatgatacttccaca
gaagcatatcaactgctgatgaagaccctggctggagaaaaccaaactgcaattgatatt
gatgagctcaaccagaagtacagtcaagcaaggaatatttctcaagacctagagaaacag
gccaacaaggtgcttgtggaggcagaggaagctggaaacagagccctggagatatatgct
aatctcaccagcctgcctactgtggattccacagggctagagaatgaagcaaataagatc
aataaggaagcagaggaactggatcaactaattgccaggaagctaaaagattatgaggac
ttgagagaagatatgaaaggaaaggagctagaagtaaagaacctcttggagaaagggaag
acagagcagcagactgcagaccagctcttggctcgagcagatgcagcaaaagccctggct
gaagaagctgctcggaagagcagtggcacactacaggaggccaataccattctcagcaat
ctgaaagactttgacaggcgggtgaatgataacaagacagcagctgaggaggcgctgaag
aagatccccaccatcagccagaccattgcagaggccaacaacaagacacaccaggcagag
ctggcactgggtaatgctgctgctgatgcccgcgaggccaaggccagagcagatgatgct
gagaaaattgccagctccgttcaggagagtgctgctgctaccagagccgaagccgacaag
acctttgctcatgtgacaggactggccagggaggtggatgacgtgatgaagcagctgcag
gatgcagaaaaagagctgaagcagaagcaggccaatgctgagcaggatatgaagatggca
ggcgaggcctcacaggctgcccaggaggcagaagacaatgcaagaaaagctaagaactct
gtgaacagcctactcactgtcattaatgacctgctggatcaactagggcaactggagact
gtggacttgaacaaattgaatgaaattgaaggtaccctgagcagtgccaaaaaccagatg
aaagatagtgacctggaccagaaagtgtctttccttgagagagaagccaagaagcaagat
gatgcgatacaggcctacaacagggacattgaagacatcctgaaggacattagcaacctg
gaagacatcaggaaaaccttgccatctggatgtttcaacaccccgtccattgagaaaccc
taa
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