Parus major (Great Tit): 107207918
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Entry
107207918 CDS
T04864
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X2
KO
K14409
protein SMG7
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107207918 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107207918 (SMG7)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107207918 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
107207918 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
107207918
NCBI-ProteinID:
XP_015491146
Ensembl:
ENSPMJG00000019216
LinkDB
All DBs
Position
8:complement(6790589..6843350)
Genome browser
AA seq
1191 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTQWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKKLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLSLFMSFLGVLCKCPLQNDYQDSGASYPL
PAVKVSMDWLKLRPSVFQEAVVDERRIWPWLISLLNSFQPHEEDLSSNNATPLPEEFELQ
GFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGK
LLFVTEIPELLLEDPSEAKESLALQETSMTELLCADGSPGLKSVLSSGRSLSNSCDAGEK
PMVTFKENIKPREMNREQGRIYPPKDMARERRDFSKGIVANKNDGKKDNNKRKNETKKCG
LDKLQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLP
SRPGFPPPAYVVPPPVAFSMSTGYTFPSGVSVPGTFLQPTAHSPTGNQVQGGKQSHIPYS
QQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQAAAQSASQLQVQALAQQQQSPTKVVQGLG
KSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMSVKQPYYLQAQDPLKLFEQSLQPPV
MQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMTDNRVITQQSNMDRRGKRQGVF
CSEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGR
SLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKAEVTPSAA
HQETSLYSLFEGTPWSPSIPASSGNPDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSN
FGPIGTPDNRDRRVTDRWKTDKPAMGGFGLDYLPTTSSSSESSWHQSSAPSGTWAVQGPP
AMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNQPH
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggacttatat
caaaaaatgctagtgactgatttggaatatgctttagataaaaaggtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacaacactccagggtcaggcgaaaaacagagca
aatccgaatcggagcgaagttcaggcgaacctttctctgtttttagaggcagctagtggc
ttctacacacagttattacaggagttgtgcacagtttttaatgtagacctgccgtgccgt
gtgaaatcttcccagctggggatcattagcaataaacagacgcacaccagcgccattgta
aagccgcagtccagctcctgctcctacatctgccagcactgccttgtccacctgggagat
attgctcgctataggaatcagaccagccaggcagagtcttactacagacatgcagctcag
cttgtcccttctaatggtcagccttataatcaattggctatcctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtg
aagactcaatggagtgtgtctgacttcatcaaggcctttattaaatttcatggccatgtg
tacctgagtaagagcttggagaaactgagccctcttcgagaaaagctggaagaacagttc
aagaagctgttgttccagaaggccttcaactctcagcagttagtccatattactgtgatc
aacctattccaactccaccacctgcgagacttcagcaacgaaacggagcaacacagctac
agccaggatgagcagctctgctggacacagctcctgtctctcttcatgtcatttcttgga
gttctgtgcaagtgtcctttacaaaatgactaccaggactctggggcttcatatcctctt
ccagctgtgaaggtttcgatggactggctgaaacttaggcccagtgttttccaggaggca
gtggttgatgaaagacgcatatggccctggctgatctctcttctaaatagtttccaacct
catgaagaagatctatccagtaataatgcaactccccttccagaagaatttgagttgcaa
ggattcctggctctgaggccctcattcaggaacttggatttttccaaaggccaccaggca
attacaggggataaagaagggcagcaacgtcggatacgtcagcagcgcctgatcttcaca
ggcaaatggattgctgataaccagccaaggttgattcaatgtgaaaatgaggtaggaaag
ctcttgtttgtgaccgaaatcccagagctcttactagaggaccctagtgaagccaaagag
agtctcgccttacaggagacatccatgacagagctgctgtgtgctgatgggagccctgga
cttaaatcagtgctgtcctctggcagaagcctgagcaacagctgtgatgcaggagaaaaa
ccaatggtcaccttcaaagagaatatcaagccccgggagatgaacagagaacaagggcgg
atctaccccccaaaggacatggcaagggagagacgggactttagcaaaggaatagtagca
aataagaatgatgggaagaaggataacaataaaagaaagaatgagaccaagaaatgtggc
ctggataagctgcaggaagcaggaaagcagaatgtggcagttcaggtgaaatcccagaca
gagatgaggaagactccagtatctgaagccaggaaaacacctgtaactcagactccaagt
caggccagcagttcccagttcatccctattcatcacccaggagccttccctccccttcct
agccggccaggatttcctcctccagcctatgttgtcccccctcctgtggctttctccatg
agcacggggtacaccttcccaagtggtgtttctgtcccaggaaccttcctccagcccaca
gctcactcacctacaggaaaccaggtgcaaggtgggaaacagtcccacattccttacagc
cagcaacggccctctggaccagggccaatgacccagggacctcagcaaacaccacctcct
tcccagcaacccctctcatctttaccagctcaggcagcagcacagtccgcaagccagtta
caggtccaagctctggctcagcagcagcagtcccccacgaaagttgtccagggcctgggg
aagagcccaccacaccactctggattccagcagtatccacagacagactcatcgaagcag
ctgtggaacccccctcaagtccaaggctccctggggaagatcatgtctgtaaagcagccc
tattacctgcaggcccaggaccctctcaaactctttgaacagtctttacagcctcctgtg
atgcaacagcagcctctggagaaaaaaatgaagcctttcccaatggagccatataaccag
aacccctcagaagtcaaggtgccagaatattactgggactcttcctatggcatgactgac
aacagggtgataacccagcagtcgaatatggaccgcagggggaagcggcagggagtcttc
tgctctgagcaggatgctgtctccaggatgaccttcgaggaccccaagagctcccctctg
cttcctccggacctgttaaagagtctggctgccttggaggaggaggaagagctgattttc
tctaatcctcctgatctttacccagctctgctggggcctctcgcctctcttcctggacga
agcctctttaagtccctgctggaaaaaccatcagaattgatgtctcagtcatcatctttc
ctgtccctcagtggcttttctctaaatcaggaaagatatccgaacaacagcatgtttaat
gaggtatatggaaaaaacatgaataccagcacaaaagcagaagtcaccccttcagctgcg
catcaggagacttcactgtattctctcttcgaagggactccatggtctccatccattcca
gccagctcaggtaatcctgatcattcaacaccagccagccagtctcctcactcctccaac
cccagcagcttgccaagctcccctccaacgcataaccacaattctgttcctttctccaac
ttcggacccattgggactccagacaacagagaccggagagtcacagaccgctggaaaaca
gataagccagcaatgggagggtttggtctggactatctcccaacaacgtcatcctcttca
gagagcagctggcaccagtccagtgctcccagtggtacctgggcagtccaaggccctccc
gccatggaggactcctcagctgtgcttatggagagcctgaagtccatctggtccagttcc
atgatgcaccctggcccctcagccctggagcagctgttgatgcagcagaagcagaagcag
cagcgcggacaaggcgccatgaatcagccgcattga
DBGET
integrated database retrieval system
