Parus major (Great Tit): 107207950
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Entry
107207950 CDS
T04864
Symbol
LMX1A
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107207950 (LMX1A)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
107207950 (LMX1A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
107207950
NCBI-ProteinID:
XP_033372430
Ensembl:
ENSPMJG00000010561
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All DBs
Position
8:1453407..1495677
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AA seq
382 aa
AA seq
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MLDGLKMEESLQSALDPATPFSSLLGRAATPKSVCEGCQRVILDRFLLRLNDSLWHEQCV
QCASCKEPLQTTCFYRDKKLYCKLDYEKLFAVKCAGCLEAVAPSELVMRAQKSVYHLHCF
CCCVCERRLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPALSDSGKSDDEDSICKLGQA
SGKGTEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQV
WFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGGGGSTGLEGMLNPYTALPPPQQLL
GMEQSVYGSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLGTADAGP
LQARVGNPIDHLYSMQNSYFTS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgggctgaagatggaggagagtttgcagagcgccctggacccggccaccccc
ttctcctccttgctgggcagagccgcgacccccaaatcggtgtgcgaagggtgtcagcga
gtgattttggaccggttcttgctgcgcctgaacgacagcctgtggcatgagcagtgcgtc
cagtgcgcgtcctgcaaggagcccctgcagaccacctgcttctaccgcgacaagaagctc
tactgcaagctggactatgagaagctgttcgcggtgaagtgcgcgggctgcctggaggcc
gtggcgcccagcgagctggtgatgcgcgcccagaagagcgtctaccacctgcactgcttc
tgctgctgcgtctgtgagcggcgcctgcagaagggcgacgagttcgtgctgaaggagggg
cagctcctctgtaagggcgactacgagaaggagcgggagctgctgagcttggtgagcccg
gctctgtcggattctggcaaaagtgatgatgaggacagcatctgcaagttgggccaggcc
tcggggaagggcactgaggatgggaaggatcacaaacggcccaagaggccacgaaccatc
ctgaccacgcagcagcggagagcattcaaggcatcatttgaggtctcctccaagccctgc
agaaaggtgcgggagacgctggcagcagagacggggctgagcgtccgtgtggtgcaggtc
tggttccagaaccagcgagccaagatgaagaagctcgccaggaggcagcagcagcagcag
caggaccagcaaaacacacagcgcctgagctcagcccagacaaacggcgggggcggcagc
acagggctggaggggatgctgaacccttacacggctctgcccccgccccagcagctgctg
ggcatggagcagagtgtctacggctccgaccctttccggcaagggctcaccccgccccag
atgcctggagaccacatgcacccctatggtgccgagcccctcttccacgacctggacagc
gacgatacctcactgagcaacctgggggactgcttcctgggcacagcagacgcagggccg
ctccaggcacgagtgggaaaccccatcgaccacctgtactccatgcagaactcctacttc
acctcctga
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