Parus major (Great Tit): 107207982
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Entry
107207982 CDS
T04864
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107207982 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107207982 (GTF2B)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107207982 (GTF2B)
Prokaryotic type
Archaeal type
TFB
107207982 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
107207982
NCBI-ProteinID:
XP_015491266
Ensembl:
ENSPMJG00000019412
LinkDB
All DBs
Position
8:15717072..15741392
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AA seq
323 aa
AA seq
DB search
MGLYTCGVRFPSALDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWR
TFSNDKATKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRA
MMNAFKEITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGV
PRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAAT
HIARKAVELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIY
PRAPDLFPADFKFDTPVDKLPQL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggcctttacacatgtggcgtgcgttttccttcggctttggatgtacttccaagagtg
acttgcccaaatcatccagattccattttagtggaggattacagagctggtgatatgatt
tgttctgagtgtgggctagtagtaggtgaccgggtcatagacgtggggtcggagtggaga
acgttcagcaatgacaaagcaaccaaagacccatctcgagttggggatacccagaatcct
ttgctgagtgatggtgacttgagtacaatgattggcaagggcacaggtgcagcaagtttt
gatgaatttgggaattcaaagtaccaaaatcgcagaactatgagcagctctgatcgtgcg
atgatgaatgcttttaaagaaattacgaacatggcagacagaatcaacctccctagaaat
atagttgatcgaacaaataatttattcaagcaagtgtatgagcaaaagagcctgaagggg
agaagtaatgatgctattgcttctgcttgtctctacatagcctgtaggcaagagggtgtt
ccaagaacatttaaagaaatatgtgcagtgtccaggatttcaaagaaagaaataggccgg
tgttttaaactgattttgaaagctctggaaaccagtgttgatttgattacaactggagac
ttcatgtcacgattctgttctaatttgggtcttcccaaacaagtacaaatggcagcaaca
catattgctcgtaaggctgtggaattagatttggttcctgggagaagccctatctctgta
gcagctgcagctatttatatggcatcacaggcttcttcagagaaaaggacacaaaaagaa
attggtgatattgctggtgtggctgatgttacgattagacagtcatacaggctgatctat
cctcgagctccagatcttttcccagcagacttcaagtttgataccccagtagacaaacta
ccacagctgtga
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