Parus major (Great Tit): 107208014
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Entry
107208014 CDS
T04864
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107208014 (PTBP2)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107208014 (PTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_NFXL1
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
107208014
NCBI-ProteinID:
XP_015491299
Ensembl:
ENSPMJG00000019348
LinkDB
All DBs
Position
8:complement(13378426..13426054)
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AA seq
505 aa
AA seq
DB search
MSSMVVTANGNDNKKFKGDDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILML
KGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQ
AVTAVQASNAPISGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKII
TFTKNNQFQALLQFGDPVNAQQAKQALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRD
YTRPDLPSGDGQPTLDPAIAAAFAKETSLLGLPVAAVPGALSPLAIPNAAAAAAAAAAGR
VGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGN
QSQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKN
FQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKMALLQMSTVEEAIQ
ALIDLHNYNLGESHHLRVSFSKSTI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatggtagttactgccaatggtaatgacaacaagaaattcaaaggtgatgat
aaaatggatggggctccttctcgtgttcttcatatcaggaaattgcctggggaagtgaca
gaaacagaagttattgctttaggtttaccttttggtaaagtaaccaacatcctgatgctg
aaagggaaaaaccaggcatttttggaacttgccacagaagaagcagctatcactatggtt
aattactactctgctgtgacacctcatcttcgtaaccaacccatttatatccagtattcc
aatcataaagagctaaagactgataacacacttaaccagcgggcccaagctgttcttcag
gcagtgacggctgtgcaggcatcaaacgctcccatcagtgggaccactgttagtgagagt
gcagtgactccagctcagagtccagtactcagaataattattgacaacatgtactatcca
gtaaccctggatgttcttcatcagatattctctaaatttggtgctgtattgaagataatc
acattcacaaagaataaccagtttcaagctttacttcagtttggtgatccagtaaacgca
cagcaagcaaaacaagccttagatggtcaaaatatctataatgcttgctgtaccctaaga
attgatttttccaaattggtgaatttgaatgtcaagtacaacaacgataagagcagggac
tacactcgtcctgaccttccatctggcgatggacagccaacgctggacccagctattgcg
gcagcatttgcaaaggagacctctcttctagggcttcctgttgcagctgttccaggagct
ctgagtcctttggctattccaaatgctgctgctgcagctgcagctgctgctgctggccgt
gtgggaatgcctggagtttcagctggtggcaatacagtcctcctggttagcaatttaaat
gaagagatggttacgccccaaagtctgtttaccctcttcggtgtttatggtgatgtgcag
cgtgtgaagattttatacaataagaaagatagtgctcttatacagatggctgatggaaac
cagtcacagctggccatgagccatcttaatggacaaaaaatgtatggaaagattattcgg
gttaccctttctaaacatcagacagttcaactacctcgagagggacttgatgaccaaggg
ctgactaaagattttggtaattcacctttgcaccgcttcaagaaacctggttcaaaaaac
tttcaaaatatattccctccttctgcaacacttcatctgtccaatattccgccatcagta
gcagaagaggatctacgcacattgtttgctaacactggaggcactgtgaaagcatttaaa
ttttttcaagatcacaagatggcacttcttcagatgtcaacagtagaagaagctattcag
gctttgattgatcttcacaattacaatctgggagaaagtcaccatctgagagtttctttc
tctaagtcaactatttaa
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