Parus major (Great Tit): 107208061
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Entry
107208061 CDS
T04864
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaj03016
]
107208061 (TRMT13)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
107208061 (TRMT13)
Transfer RNA biogenesis [BR:
pmaj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107208061 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
DUF7077
Motif
Other DBs
NCBI-GeneID:
107208061
NCBI-ProteinID:
XP_015491430
Ensembl:
ENSPMJG00000019327
LinkDB
All DBs
Position
8:complement(12301102..12306939)
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AA seq
476 aa
AA seq
DB search
MAARGPPGAAMAALEPEPGRCAHFVLRKGRFCRMIPAPGRRFCGEHGHEEEQNDRKRIPC
PLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDIIEIPEKKVPLSSLSIEEL
QNLIIKLKKASNGLELHLKEQILSHQALQEALNDPKNGESAFKHLKQQASILGNMEKLHL
LGPGRCFVEFGAGRGKLSHWVDIALENVESVLFLLVERATTRFKVDGKHKKRDSIFERLQ
VDIQHLCLNKVPILEKKKLPLVGIGKHLCGAATDLALRCLVESYTTCCDGEGEEPAPKRC
RAAQTEGAPHKSAGNESTTGDHKPVAGIVIALCCHHKCDWTHYVGRDFFKSVGLGPVEFH
YFQRMSSWATCGMQETTSKASGGEGSEDQTNDTEEHEETLSRTESGSDTLQGILSVEERK
EIGCLCKRLIDHGRIEYLQHRGYKAALQYYTESAVSLENVLLTAVPNPSLIPEPTL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggggccgccgggagcagcgatggcggcgctggagccggagccggggcgc
tgcgcgcacttcgtgctgaggaaggggcgcttctgcaggatgatcccggcgcccggcagg
cgcttctgcggggagcacgggcacgaggaggaacaaaatgacagaaaaagaattccgtgc
cctcttgatccgaaacacactgtatatgaagaccaactacaaaaacatttaaaaaaatgt
aactcaagagagaagccaaagcccgtctactttgttcaagatattaatgctggtttaaaa
gacataatagaaataccagaaaaaaaagttcctctatcttctctatctatcgaagagcta
cagaacttaattatcaagttgaaaaaagcaagtaatggcctggaacttcatcttaaggaa
caaatactgtcccaccaggctttacaagaagccttaaatgacccaaagaatggggaatct
gctttcaaacacctgaaacaacaggcttctattttaggtaacatggaaaaattgcattta
cttggtccaggaaggtgttttgtcgagtttggagctgggcgaggaaagttgtctcattgg
gttgatattgccttagagaatgttgaaagtgttctgtttttgcttgtggaaagggcaacc
acaagattcaaggtggatggaaaacacaaaaagagagattctatatttgagaggcttcaa
gtagacattcagcacttatgtttaaataaggtacctattttggagaagaaaaaactacca
ttggtaggaattgggaagcatttgtgtggtgctgcgacagatcttgctttgagatgcttg
gttgaaagttacaccacttgctgtgatggagaaggtgaagagcctgcaccaaaacgctgc
agggctgctcagacagagggggctcctcacaaatctgctggtaatgaaagcaccacagga
gaccataagcctgtagctggaattgttattgctctgtgttgccatcacaagtgtgactgg
acacattatgtaggcagagatttctttaaatcagtgggactgggaccagtggaattccat
tattttcagagaatgagtagttgggccacttgtggcatgcaagaaaccacaagcaaagct
tctggaggtgaaggcagtgaagatcaaactaatgacacagaagaacatgaggaaacgctc
agcaggacagagagtggttctgatactttacaagggatactgagtgttgaggagcgaaag
gagatcggttgcctttgcaaacggctgattgatcatggacggattgagtatttacaacac
cggggatacaaggctgcactgcagtattatacagagtctgctgtgtccttggagaatgtc
ctgttgacagctgtcccaaatccttctttgataccagagccaactctatga
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integrated database retrieval system
